DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOCS4 and socs4

DIOPT Version :10

Sequence 1:NP_543143.1 Gene:SOCS4 / 122809 HGNCID:19392 Length:440 Species:Homo sapiens
Sequence 2:XP_031746340.1 Gene:socs4 / 549828 XenbaseID:XB-GENE-481718 Length:467 Species:Xenopus tropicalis


Alignment Length:441 Identity:319/441 - (72%)
Similarity:363/441 - (82%) Gaps:12/441 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAENNENISKNVDVRPKTSRSRSADRKDGYVWSGKKLSWSKKSESYSDAETVNGIEKTEVSLRNQ 65
            ||||.|:....:|||||:|||||||||||||||||||:|..|:...||.:|:|.:|..:.:.::|
 Frog    32 MAENIEDKLGELDVRPKSSRSRSADRKDGYVWSGKKLTWLNKNGHSSDGDTINVVEDEDCATQSQ 96

Human    66 ERKHSCSSIELDLDHSCGHRFLGRSLKQKLQDAVGQCFPIKNCSSRHSSGLPSKRKIHISELMLD 130
            ||||||||||||||.||||:.||||||||||||||||||||.||:||||.|.|||||||||||||
 Frog    97 ERKHSCSSIELDLDRSCGHKILGRSLKQKLQDAVGQCFPIKTCSNRHSSTLSSKRKIHISELMLD 161

Human   131 KCPFPPRSDLAFRWHFIKRHTAPINSKSDEWVSTDLSQTELRDGQLKRRNMEENINCFSHTNVQP 195
            ||||||:||||:|||.|||||||::....|||..|....:.::.|:|.:|.:...:|....:..|
 Frog   162 KCPFPPKSDLAYRWHLIKRHTAPVSQTKGEWVINDGLDLDGKEIQVKDKNSDGGEDCLLDGHATP 226

Human   196 CVITTDN--ALCREGPMTGSVMNLVSNNSIEDSDMDSDDEILTLCTSSRKRNKPKWDLDDEILQL 258
            |.:...|  :|..:|          |.:|.||||:|||||.:|||:||||||||||:.|||..|.
 Frog   227 CKVNIGNVESLGTKG----------SRSSKEDSDLDSDDEAVTLCSSSRKRNKPKWETDDESFQA 281

Human   259 ETPPKYHTQIDYVHCLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVS 323
            ||||||||||||||||||||.|||||||||||||:||||||||||||||||||||||||||||||
 Frog   282 ETPPKYHTQIDYVHCLVPDLFQINNNPCYWGVMDRYAAEALLEGKPEGTFLLRDSAQEDYLFSVS 346

Human   324 FRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFS 388
            ||||||||||||||||||||||||||||||:|::|||||||||||:|||||||||:||.|||||:
 Frog   347 FRRYSRSLHARIEQWNHNFSFDAHDPCVFHAPNVTGLLEHYKDPSSCMFFEPLLSSPLNRTFPFT 411

Human   389 LQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVRVLRIDAPEQQ 439
            ||||||..||..|.||||||||:|||||||||||||||||||.|:|||||:
 Frog   412 LQHICRAAICTSTNYDGIDALPVPSSMKLYLKEYHYKSKVRVRRVDAPEQR 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOCS4NP_543143.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 19/27 (70%)
SOCS 58..111 CDD:432667 41/52 (79%)
SH2_SOCS4 275..375 CDD:198248 93/99 (94%)
SOCS_SOCS4 384..439 CDD:239707 45/54 (83%)
socs4XP_031746340.1 SOCS 91..142 CDD:432667 41/50 (82%)
SH2_SOCS4 298..398 CDD:198248 93/99 (94%)
SOCS 407..462 CDD:470605 45/54 (83%)

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