DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOCS4 and F39B2.5

DIOPT Version :10

Sequence 1:NP_543143.1 Gene:SOCS4 / 122809 HGNCID:19392 Length:440 Species:Homo sapiens
Sequence 2:NP_493574.2 Gene:F39B2.5 / 185487 WormBaseID:WBGene00009556 Length:192 Species:Caenorhabditis elegans


Alignment Length:155 Identity:45/155 - (29%)
Similarity:67/155 - (43%) Gaps:23/155 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   287 YWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCV 351
            |||.:|...||.||...|.|.||:|||..|.:||:||:....|..|:|:...:...:..:..|.|
 Worm    17 YWGDLDWKWAERLLLLCPIGYFLIRDSRSETHLFTVSYHFQDRVYHSRLSLEDSRRNLGSRQPYV 81

Human   352 FHSPDITGLLE-----------------HYKDPSACMFFEPLLSTPLIR--TFPFSLQHICR-TV 396
              |.|...|:|                 ||:...........|:.||.:  ..| |||::|| |:
 Worm    82 --SRDYWNLVEIIERSLEQSLTGQQEM
LHYRRGHEAEAARVNLTRPLTKRELLP-SLQYLCRFTL 143

Human   397 ICNCTTYDGIDALPIPSSMKLYLKE 421
            ..:..........|:|.::..||.:
 Worm   144 KTSQQKPPTPKTAPLPPTILKYLSD 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOCS4NP_543143.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
SOCS 58..111 CDD:432667
SH2_SOCS4 275..375 CDD:198248 31/104 (30%)
SOCS_SOCS4 384..439 CDD:239707 11/39 (28%)
F39B2.5NP_493574.2 SH2_SOCS7 5..106 CDD:198251 29/90 (32%)
SOCS 126..169 CDD:128549 12/44 (27%)
Blue background indicates that the domain is not in the aligned region.

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