DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4L1 and LOC105946865

DIOPT Version :9

Sequence 1:NP_001004717.1 Gene:OR4L1 / 122742 HGNCID:15356 Length:312 Species:Homo sapiens
Sequence 2:XP_012815555.2 Gene:LOC105946865 / 105946865 -ID:- Length:346 Species:Xenopus tropicalis


Alignment Length:311 Identity:107/311 - (34%)
Similarity:180/311 - (57%) Gaps:13/311 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     9 VTEFILLGFFGRWELQIFFFVTFSLIYGATVMGNILIMVTVTCRSTLHSPLYFLLGNLSFLDMCL 73
            :.:|||.|....:..::..||.|.:||..:.:.|:.:.:.:.....||:|:||.|.:||.:|||.
 Frog    38 LVDFILTGLSTAYATELLLFVLFLVIYVFSFLSNLSMTLLIWAVPKLHTPMYFFLSHLSLIDMCY 102

Human    74 STATTPKMIIDLLTDHKTISVWGCVTQMFFMHFFGGAEMTLLIIMAFDRYVAICKPLHYRTIMSH 138
            |:...|||:.|.||..|.||...|.|||||...|..:|..::..||:|||||||:||.|..||:.
 Frog   103 SSTIIPKMLSDFLTKRKHISFSACATQMFFFAMFATSECFMVTAMAYDRYVAICQPLVYHIIMNK 167

Human   139 KLLKGFAILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETYTLELFVIADS 203
            .|.....|.::....|.|::......:.|.||..:||:.:||:|.::||.|:.::..:..|.:.|
 Frog   168 NLCWLLVIGAYFSSLLASVTHTAAIFSFPLCGSQLINHFYCDIPPLLKLVCMHSHARKSVVFSLS 232

Human   204 GLLSFTCFILLLVSYIVILVSV-PKKSSHGLSKALSTLSAHIIVVTLFFGPCIFIYVWP-----F 262
            .::.....:::|.||:.|:.:: ..:|:||.|||.||.::|:.||.||:.....||..|     |
 Frog   233 MVMGIISLLIILTSYVYIICAILGIQSTHGRSKAFSTCASHLTVVILFYSSVFSIYFRPSLGLEF 297

Human   263 SSLASNKTLAVFYTVITPLLNPSIYTLRNKKMQEAIR-----KLRFQYVSS 308
            .::  :|..::||||.:|||||.||:.:|.:::.|::     |::.:.::|
 Frog   298 GNI--DKFFSIFYTVASPLLNPLIYSFKNMEVKNALKHFLALKIKTKLLNS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4L1NP_001004717.1 7tm_4 31..301 CDD:304433 99/280 (35%)
LOC105946865XP_012815555.2 7tm_GPCRs 63..324 CDD:421689 96/262 (37%)
TM helix 2 88..114 CDD:410628 12/25 (48%)
TM helix 3 126..156 CDD:410628 15/29 (52%)
TM helix 4 169..190 CDD:410628 4/20 (20%)
TM helix 5 224..254 CDD:410628 6/29 (21%)
TM helix 6 261..291 CDD:410628 14/29 (48%)
TM helix 7 298..324 CDD:410628 12/27 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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