DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4L1 and LOC101734540

DIOPT Version :9

Sequence 1:NP_001004717.1 Gene:OR4L1 / 122742 HGNCID:15356 Length:312 Species:Homo sapiens
Sequence 2:XP_004918398.3 Gene:LOC101734540 / 101734540 -ID:- Length:324 Species:Xenopus tropicalis


Alignment Length:308 Identity:126/308 - (40%)
Similarity:181/308 - (58%) Gaps:13/308 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDLKNGSLVTEFILLGFFGRWELQIFFFVTFSLIYGATVMGNILIMVTVTCRSTLHSPLYFLLGN 65
            |.|.|.:...|||.||........:..||.|.|||..|::||:||::.:...|.||:|:|..|.|
 Frog     9 MMLGNHTTPFEFIFLGLSNVPSAGLPLFVLFLLIYLMTLVGNLLILLMICTDSHLHTPMYMFLSN 73

Human    66 LSFLDMCLSTATTPKMIIDLLTDHKTISVWGCVTQMFFMHFFGGAEMTLLIIMAFDRYVAICKPL 130
            |:.||:..||.|:|:|:.|..:..|||::..|:||.||...|...|:.||..|::|||||||.||
 Frog    74 LAGLDIFYSTVTSPRMLSDFFSKTKTITLPVCITQFFFFFSFICIELYLLAAMSYDRYVAICHPL 138

Human   131 HYRTIMSHKLLKGFAILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETY-- 193
            ||..||..|.......::|..|||.|:...:.|:.|.|||.|:|...|||||.:..|:|..|:  
 Frog   139 HYIQIMHPKFCAMMVSVAWAGGFLTSLIHTLCTLRLTFCGPNLIQGFFCDLPQLFALSCTNTFVN 203

Human   194 TLELFVIA---DSGLLSFTCFILLLVSYIVILVSVPK-KSSHGLSKALSTLSAHIIVVTLFFGPC 254
            .|.:|::.   .||.|..|     .|.||.|..::.| |:..|..||.||.::|:.||.:|:|..
 Frog   204 VLVMFLVGIFMGSGALGIT-----FVPYIHIFRTIKKIKTWRGKLKAFSTCASHLTVVFVFYGTL 263

Human   255 IFIYV--WPFSSLASNKTLAVFYTVITPLLNPSIYTLRNKKMQEAIRK 300
            ||.|:  .|.:..:.::.::|.|||:||:|||.||:||||.::||.|:
 Frog   264 IFTYLRPTPRNGFSEDRLVSVVYTVVTPILNPIIYSLRNKDLKEAFRR 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4L1NP_001004717.1 7tm_4 31..301 CDD:304433 116/278 (42%)
LOC101734540XP_004918398.3 7tmA_OR8S1-like 34..309 CDD:320357 116/279 (42%)
TM helix 1 35..59 CDD:320357 11/23 (48%)
TM helix 2 68..90 CDD:320357 10/21 (48%)
TM helix 3 106..128 CDD:320357 9/21 (43%)
TM helix 4 151..167 CDD:320357 5/15 (33%)
TM helix 5 204..227 CDD:320357 7/27 (26%)
TM helix 6 246..268 CDD:320357 9/21 (43%)
TM helix 7 277..302 CDD:320357 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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