DRSC/TRiP Functional Genomics Resources

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Protein Alignment Btc and Krn

DIOPT Version :9

Sequence 1:NP_031594.1 Gene:Btc / 12223 MGIID:99439 Length:177 Species:Mus musculus
Sequence 2:NP_524129.1 Gene:Krn / 326198 FlyBaseID:FBgn0052179 Length:217 Species:Drosophila melanogaster


Alignment Length:171 Identity:49/171 - (28%)
Similarity:66/171 - (38%) Gaps:11/171 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LLLVLALGLAILHCVVA-DGNTTRTPETNGSLCGAPGENCTGTTPRQKVKTHFSRCPKQY-KHYC 77
            |||..||..|.|....| .......|....:....|......||||..|......||..| ..||
  Fly     7 LLLATALIGAYLPLTAACSSRAIAKPRPTAAPILPPDNVEISTTPRPNVTFPIFACPPTYVAWYC 71

Mouse    78 IH-GRCRFVV---DEQTPSCICEKGYFGARCE--RVDLFYLQQDRGQILVVCLIVVMVVFIILVI 136
            :: |.| |.|   :|...:|.|..|:.|.|||  .:|..||......:|....||......:|.:
  Fly    72 LNDGTC-FTVKIHNEILYNCECALGFMGPRCEYKEIDGSYLPTRNRVMLEKASIVSGATLALLFM 135

Mouse   137 GVCTCCHPLR--KHRKKKKEEKMETLDKDKTPISEDIQETN 175
            .:|.....||  |.:|:|..:...|...|....:|.:.|.:
  Fly   136 AMCCVVLYLRHEKLQKQKLHDSTTTTTTDGGCQNEGMDEVD 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BtcNP_031594.1 PHA02887 <51..109 CDD:165214 22/64 (34%)
KrnNP_524129.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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