DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfp36l2 and Tis11

DIOPT Version :9

Sequence 1:NP_001001806.1 Gene:Zfp36l2 / 12193 MGIID:107945 Length:484 Species:Mus musculus
Sequence 2:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster


Alignment Length:427 Identity:128/427 - (29%)
Similarity:172/427 - (40%) Gaps:144/427 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse   102 QLKEPSGGSGTALVTKESKFRDRSFSENGERSQHLLHLQQQQKGGSGSQINSTRYKTELCRPFEE 166
            |.::|:..|   |||......:.:.....||:|. ..|..||      .:|::||||||||||||
  Fly    92 QQQQPAVAS---LVTITENLGNMNLHRKLERTQS-EPLPPQQ------PMNTSRYKTELCRPFEE 146

Mouse   167 SGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGG 231
            :|.||||||||||||.||||::.||||||||.|||||::|||||||||||:|||||.|...:...
  Fly   147 AGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNADEARAQQAAQA 211

Mouse   232 GASGDLRAFGARDALHLGFAREPRPKLHHSLSFSGFPSGHHQPPGG------------------- 277
            ..|.......::.:....|:    ||.:.|.:.|...|......||                   
  Fly   212 AKSSTQSQSQSQQSSSQNFS----PKSNQSSNQSSNSSSSSSSSGGGGGGGNSINNNNGSQFYLP 272

Mouse   278 LESPLLL------DSPTSRTPPPPSSSASS------------CSSSASSCSSASAASTPSGAPTC 324
            |..||.:      :|||......|::|.:|            .|:.|.|.||||:.|:.||....
  Fly   273 LSPPLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDALQHGYLASNGAKSNSSASSTSSASGMGLG 337

Mouse   325 CATAAAAALLYGPGGAEDLLSPGAPCASCSSSGANNAFAFGPELSSLITPLAIQTHNFAAAAAAA 389
            .:......::.|.|                                    |.:..|         
  Fly   338 MSMGIGQGMIIGQG------------------------------------LGMGHH--------- 357

Mouse   390 YYRNQQQGLTGPAPPPAQP--PAAPAPPSPPFGFQLPRRLSESPVFDAPPSPPDSLSDRDSYLSG 452
                      |||.||..|  |.:|....||:                           |..:||
  Fly   358 ----------GPATPPESPNVPISPVHTPPPY---------------------------DVVVSG 385

Mouse   453 SLSSGSLSGSE--------SP-SLDPGRRLPIFSRLS 480
            |.:..:..||:        :| ..:...|||:|:|||
  Fly   386 SGAGNNSVGSKQLLQKSVSTPMQQEDTPRLPVFNRLS 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfp36l2NP_001001806.1 Tis11B_N 3..133 CDD:282420 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..152 12/49 (24%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:P47974 155..160 4/4 (100%)
zf-CCCH 156..181 CDD:279036 22/24 (92%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:P47974 172..213 33/40 (83%)
zf-CCCH 194..218 CDD:279036 20/23 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..304 14/79 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..484 24/97 (25%)
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 22/24 (92%)
zf-CCCH 174..198 CDD:279036 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10408
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 158 1.000 Inparanoid score I4247
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000616
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2078
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.950

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