DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bmp8b and scw

DIOPT Version :9

Sequence 1:NP_031585.2 Gene:Bmp8b / 12164 MGIID:107335 Length:399 Species:Mus musculus
Sequence 2:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster


Alignment Length:426 Identity:120/426 - (28%)
Similarity:194/426 - (45%) Gaps:88/426 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    17 VLGGGHLSHPPHVFPQRRLGVREPRDMQREIREVLGLPGRPRSRAPVGAAQQP---ASAPLFMLD 78
            |....|:..|.:   |:|     |...|.|:.::|.|..|||.:|      :|   .||..|:|:
  Fly    20 VTTNNHIEMPIY---QKR-----PLSEQMEMIDILDLGDRPRRQA------EPNLHNSASKFLLE 70

Mouse    79 LYRAMTDDSGGGTPQPHL-----------------DRADL-----IMSFVNIVERDRTLGYQEPH 121
            :|..:::|.   .|:..|                 ||.::     |::|.:.::.::.....:.|
  Fly    71 VYNEISEDQ---EPKEVLHQRHKRSLDDDILISNEDRQEIASCNSILTFSSRLKPEQLDNELDMH 132

Mouse   122 WKEFHFDLTQIPAGEAVTAAEFRIYKEPSTHPLNTTLHISMFEVVQEHSNRESDLFFLDLQTLR- 185
               ..|:...:|...::..|..||||:||.........:|::   ::..||: |..:..|.::. 
  Fly   133 ---ITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFTVSVY---RKLDNRQ-DFSYRILGSVNT 190

Mouse   186 -SGDEGWLVLDITAASDRWLLNHHKDLGLRLYVETEDGHS-IDPGLAGLLGRQAPR-SRQPFMVG 247
             |...|||..::|.....||  |:|.|..|..:....|.| :....|||:..||.| |.:||:||
  Fly   191 TSSQRGWLEFNLTDTLRYWL--HNKGLQRRNELRISIGDSQLSTFAAGLVTPQASRTSLEPFIVG 253

Mouse   248 FFRANQSPVRAP--RTARPLKKKQLNQINQLPHSNKHLGILDDGHGS------------HGREVC 298
            :|...:..|:..  |..|.|:|::.                  |.||            ...:.|
  Fly   254 YFNGPELLVKIQKLRFKRDLEKRRA------------------GGGSPPPPPPPPVDLYRPPQSC 300

Mouse   299 RRHELYVSFRDLGWLDSVIAPQGYSAYYCAGECIYPLNSCMNSTNHATMQALVHLMKPDIIPKVC 363
            .|....|.|::|...:.||||:.:.||:|.|.|.:||.:.||:||||.:|.|:||.:|. :||.|
  Fly   301 ERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPH-LPKPC 364

Mouse   364 CVPTELSAISLLYYDRNNNVILRRERNMVVQACGCH 399
            ||||.|.||::|.|...:.:.|.:.:..|.:.||||
  Fly   365 CVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bmp8bNP_031585.2 TGFb_propeptide 32..248 CDD:279078 62/244 (25%)
TGF_beta 298..398 CDD:278448 42/99 (42%)
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 59/232 (25%)
TGFB 300..400 CDD:214556 43/100 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.880

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