DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bmp6 and scw

DIOPT Version :9

Sequence 1:NP_031582.1 Gene:Bmp6 / 12161 MGIID:88182 Length:510 Species:Mus musculus
Sequence 2:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster


Alignment Length:459 Identity:128/459 - (27%)
Similarity:200/459 - (43%) Gaps:108/459 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    71 HEKREM--QKEILSVLGLPHRPRPLHGLQQPQPPVLPPQQQQQQQQQQTAREEPPPGRLKSAPLF 133
            ::||.:  |.|::.:|.|..||                            |.:..|....||..|
  Fly    31 YQKRPLSEQMEMIDILDLGDRP----------------------------RRQAEPNLHNSASKF 67

Mouse   134 MLDLYNALSNDDEEDGASEGVGQEPGSHGGASSSQLRQPSPGAAHSLNRKSLLAPGPGGGASPLT 198
            :|::||.:|.|           |||..               ..|..:::||       ....|.
  Fly    68 LLEVYNEISED-----------QEPKE---------------VLHQRHKRSL-------DDDILI 99

Mouse   199 SAQDSAFLNDADMVMSFVNLV---EYDKEFSPHQRHHKEFKFNLSQIPEGEAVTAAEFRVYKDCV 260
            |.:|...:...:.:::|.:.:   :.|.|...|      ..||.:.:|...::..|..|:||...
  Fly   100 SNEDRQEIASCNSILTFSSRLKPEQLDNELDMH------ITFNTNDVPVDLSLVQAMLRIYKQPS 158

Mouse   261 VGSFKNQTFLISIYQVLQEHQHRDSDLFLLDTRVVWASEEGWLEFDITATSNLWVVTPQHNMGLQ 325
            :.. :...|.:|:|:.|...|  |....:|.:....:|:.|||||::|.|...|:    ||.|||
  Fly   159 LVD-RRANFTVSVYRKLDNRQ--DFSYRILGSVNTTSSQRGWLEFNLTDTLRYWL----HNKGLQ 216

Mouse   326 ----LSVVTRDGLHVNPRAAGLVGRDGPYDK-QPFMVAFFKVSEVHVRTTRSASSRRRQQSRNRS 385
                |.:...|. .::..|||||........ :||:|.:|...|:.|:..:....|..::.|   
  Fly   217 RRNELRISIGDS-QLSTFAAGLVTPQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRR--- 277

Mouse   386 TQSQDVSRGSGSSD---------YNGSELKTACKKHELYVSFQDLGWQDWIIAPKGYAANYCDGE 441
                   .|.||..         |...:   :|::....|.|::|...:|:||||.:.|.:|.|.
  Fly   278 -------AGGGSPPPPPPPPVDLYRPPQ---SCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGG 332

Mouse   442 CSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRA 506
            |:|||...||||||||||||:||..| ::|||||.||.|.||::|.:.:...:.|.||:..|.:.
  Fly   333 CNFPLGTKMNATNHAIVQTLMHLKQP-HLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKE 396

Mouse   507 CGCH 510
            ||||
  Fly   397 CGCH 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bmp6NP_031582.1 TGFb_propeptide 58..359 CDD:279078 69/297 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..129 4/41 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..199 8/55 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..402 6/40 (15%)
TGFB 409..510 CDD:214556 48/100 (48%)
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 67/289 (23%)
TGFB 300..400 CDD:214556 48/100 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.880

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