DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ASCL4 and l(1)sc

DIOPT Version :10

Sequence 1:NP_982260.3 Gene:ASCL4 / 121549 HGNCID:24311 Length:172 Species:Homo sapiens
Sequence 2:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster


Alignment Length:137 Identity:42/137 - (30%)
Similarity:61/137 - (44%) Gaps:47/137 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    76 KRNERERQRVRCVNEGYARLRDHLPREL----------ADKRLSKVETLRAAIDYIKHLQELLER 130
            :||.|||.||:.||.|:..||.|||:.:          :.|:||||:|||.|::||:.||::|: 
  Fly    87 RRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLD- 150

Human   131 QAWGLEGAAGA---VPQRRAECNSDGES----------------------------KASSAPSPS 164
                 :|.|.:   :.....|.::||.|                            .||..||.|
  Fly   151 -----DGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHSASPTPSYS 210

Human   165 SEPEEGG 171
            .....||
  Fly   211 GSEISGG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ASCL4NP_982260.3 bHLH_SF 66..129 CDD:469605 28/62 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..172 11/56 (20%)
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 23/54 (43%)

Return to query results.
Submit another query.