DRSC/TRiP Functional Genomics Resources

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Protein Alignment AEBP2 and egrh-1

DIOPT Version :10

Sequence 1:NP_001107648.1 Gene:AEBP2 / 121536 HGNCID:24051 Length:517 Species:Homo sapiens
Sequence 2:NP_510462.2 Gene:egrh-1 / 181580 WormBaseID:WBGene00007772 Length:461 Species:Caenorhabditis elegans


Alignment Length:409 Identity:89/409 - (21%)
Similarity:130/409 - (31%) Gaps:110/409 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    17 LSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGGGEAET 81
            |.|.|..|....|....:|....:|.:.:|           ||...|.|                
 Worm    97 LMPAPSSSYKEPAYSSEQPSSSSDEAKPKE-----------LLGSNSFG---------------- 134

Human    82 MSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSA----------------ESLVGSSG 130
                .|...:  |..:.:.|:...::.|.||:|.|..:|..                ::|...:|
 Worm   135 ----VPRMTN--GNSKQKPEELTLKDIEISSTGPGGVDSPGLSAAMFQFSPMVEHFLQNLTNKAG 193

Human   131 -----------GSSSDETRSL--SPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSS------ 176
                       |.:..|...|  |.....||..|....:.|..|..||.:......|||      
 Worm   194 LPELVVDSKTAGLNHQEPSDLIKSVQVRRSSIEDQKFSDVLHVPTLPRKTSEPSHLGSSLQNEHP 258

Human   177 -SSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSIS--STIMDVDSTISS 238
             |:|..|:.......|....|...|........:|:..:|.|...|..|:|  ::..|..|....
 Worm   259 QSNSRPSTVIPRVQRTNTSASLTRSMDHSSMSPISAHDDPYSNSASYSSLSTHTSFSDSASLAHF 323

Human   239 GRSTPAMMNGQ-------------GSTTSSSKNIA---------------YNCCWDQCQACFNSS 275
            ...|..|.:..             .||:...|||.               |.|..|.|...|:.|
 Worm   324 EPKTEPMDDYSYNFSDNDFNSFEFSSTSEELKNIGCQKMKSSKMPLQDRPYKCPRDGCDRRFSRS 388

Human   276 PDLADHIRSIHVDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFA 340
            .:|..||| ||. ||:.       ..|::.....:....|..|:.||:|:|||.|.:  |...||
 Worm   389 DELTRHIR-IHT-GQKP-------FQCRICMRAFSRSDHLTTHVRTHTGEKPFSCDI--CGRKFA 442

Human   341 SQGGLARHVPTHFSQQNSS 359
            ......||...|.:.::.|
 Worm   443 RSDERKRHTKVHKTSRSGS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AEBP2NP_001107648.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..229 49/249 (20%)
Interaction with RBBP4 209..294 29/114 (25%)
COG5048 <215..>339 CDD:227381 39/153 (25%)
C2H2 Zn finger 266..286 CDD:275368 8/19 (42%)
C2H2 Zn finger 297..322 CDD:275368 3/24 (13%)
C2H2 Zn finger 330..352 CDD:275368 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..394 2/8 (25%)
Interaction with SUZ12. /evidence=ECO:0000269|PubMed:29499137 407..478
Important for nucleosome binding activity of the PRC2 complex. /evidence=ECO:0000269|PubMed:29499137 495..517
egrh-1NP_510462.2 zf-C2H2 374..398 CDD:395048 10/24 (42%)
C2H2 Zn finger 376..398 CDD:275368 9/22 (41%)
zf-H2C2_2 390..415 CDD:463886 9/33 (27%)
C2H2 Zn finger 406..426 CDD:275368 3/19 (16%)
zf-H2C2_2 418..443 CDD:463886 11/26 (42%)
C2H2 Zn finger 434..454 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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