DRSC/TRiP Functional Genomics Resources

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Protein Alignment AEBP2 and klf-1

DIOPT Version :10

Sequence 1:NP_001107648.1 Gene:AEBP2 / 121536 HGNCID:24051 Length:517 Species:Homo sapiens
Sequence 2:NP_497632.1 Gene:klf-1 / 175404 WormBaseID:WBGene00018990 Length:497 Species:Caenorhabditis elegans


Alignment Length:135 Identity:36/135 - (26%)
Similarity:59/135 - (43%) Gaps:24/135 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   226 SSTIMDVDSTISSGRSTPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQ 290
            :|..:.|||::......|:..:...::..|.|.: ::|....|...:..|..|..|.|: |. |:
 Worm   380 ASQRLHVDSSLEDSNCEPSPSSSYDASEPSVKRL-HHCTHPNCGKVYTKSSHLKAHFRT-HT-GE 441

Human   291 RGGVFVCLWKGCKVYNTPSTSQSW-------LQRHMLTHSGDKPFKCVVGGCNASFASQGGLARH 348
            :  .:.|.|.||          .|       |.||...|:||:||||  ..|:.:|:....|:.|
 Worm   442 K--PYECSWDGC----------DWRFARSDELTRHYRKHTGDRPFKC--SQCSRAFSRSDHLSLH 492

Human   349 VPTHF 353
            :..||
 Worm   493 MKRHF 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AEBP2NP_001107648.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..229 1/2 (50%)
Interaction with RBBP4 209..294 15/67 (22%)
COG5048 <215..>339 CDD:227381 31/119 (26%)
C2H2 Zn finger 266..286 CDD:275368 5/19 (26%)
C2H2 Zn finger 297..322 CDD:275368 8/31 (26%)
C2H2 Zn finger 330..352 CDD:275368 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..394 2/2 (100%)
Interaction with SUZ12. /evidence=ECO:0000269|PubMed:29499137 407..478
Important for nucleosome binding activity of the PRC2 complex. /evidence=ECO:0000269|PubMed:29499137 495..517
klf-1NP_497632.1 C2H2 Zn finger 419..438 CDD:275368 5/19 (26%)
zf-H2C2_2 430..457 CDD:463886 10/40 (25%)
C2H2 Zn finger 446..468 CDD:275368 8/31 (26%)
zf-H2C2_2 460..485 CDD:463886 12/26 (46%)
C2H2 Zn finger 476..496 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.

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