DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bmi1 and Psc

DIOPT Version :10

Sequence 1:NP_031578.2 Gene:Bmi1 / 12151 MGIID:88174 Length:324 Species:Mus musculus
Sequence 2:NP_523725.2 Gene:Psc / 36431 FlyBaseID:FBgn0005624 Length:1601 Species:Drosophila melanogaster


Alignment Length:418 Identity:134/418 - (32%)
Similarity:192/418 - (45%) Gaps:116/418 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 RTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLL 67
            |...:.:|.:|||::|.||.||.|:||||:|||||||.:|::.:|...::||.|::.::..:|  
  Fly   248 RPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERFCPRCEMVINNAKP-- 310

Mouse    68 NIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEEKRIITDDEIIS 132
            ||:||.|||.|||||||||::.|:.|:|.||...|. :||..:.|.||:  |.|..|.:..:.:|
  Fly   311 NIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDRPE-EAALATPEQRGD--DTEHLIFSPSDDMS 372

Mouse   133 LSIEFFDQSRLDRKVNKEKPKEEVNDKRYLRCPAAMTVMHLRKFLRSKMDI-PNTFQIDVMYEEE 196
            ||:|:.:...|  |.:.|....:....|||:|||...|.||:||:..|.:| ...|.||:||:.:
  Fly   373 LSLEYAELGEL--KTDSEPELVDTLRPRYLQCPAMCRVSHLKKFVYDKFEIDAQRFSIDIMYKVK 435

Mouse   197 P--LKDYYTLMDIAYIYTWRRNGPLPLKYR--------VRPTCKR-------------------- 231
            .  |.||||||||||||||:|:.|:...||        |:|..:|                    
  Fly   436 TIVLLDYYTLMDIAYIYTWKRDAPMRFYYRVYESPQPLVKPAPRRVLPLKLEKQERENQEQQLAV 500

Mouse   232 ---------------------MKMSHQRDGLTNAGELESDSGS-------------------DKA 256
                                 :|:..|........|:..|..:                   :|:
  Fly   501 EVASSKVEPVSLPEDQKAEASIKVEEQESTREIVKEVIKDVAATPPTETLKLVINRNMLDKREKS 565

Mouse   257 NSPAGGVPSTSSCLPSPSTPVQSP-------------------------------HPQFPHISS- 289
            :||.  :.|.||...||.|||.||                               .|..|...| 
  Fly   566 HSPQ--MSSKSSSKSSPCTPVSSPSEPNIKLKIDLSKQNSVTIIDMSDPERREIVKPLKPEKESR 628

Mouse   290 ----TMNGTSNSPSANHQSSFASRPRKS 313
                ..:|:..|.|::..||...|.|||
  Fly   629 SKKKDKDGSPKSSSSSSSSSSGERKRKS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bmi1NP_031578.2 RING-HC_PCGF4 5..101 CDD:438394 48/95 (51%)
Nuclear localization signal. /evidence=ECO:0000255 81..95 8/13 (62%)
RAWUL_PCGF4 130..224 CDD:340685 42/96 (44%)
Interaction with PHC2. /evidence=ECO:0000250|UniProtKB:P35226 160..180 11/19 (58%)
Interaction with E4F1. /evidence=ECO:0000250|UniProtKB:P35226 162..226 35/74 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..324 29/137 (21%)
PscNP_523725.2 RING_Ubox 254..341 CDD:473075 46/88 (52%)
RAWUL_PCGF2_like 371..465 CDD:340602 42/95 (44%)
PHA03247 <1160..1381 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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