DRSC/TRiP Functional Genomics Resources

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Protein Alignment SDR9C7 and Rdh1

DIOPT Version :10

Sequence 1:NP_683695.1 Gene:SDR9C7 / 121214 HGNCID:29958 Length:313 Species:Homo sapiens
Sequence 2:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster


Alignment Length:198 Identity:53/198 - (26%)
Similarity:88/198 - (44%) Gaps:26/198 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    26 KYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRD-----TSYRLQTTLLDVTKSES 85
            |...:||.::|.|...|.::..||..|..||......:|.::|     .:..:.:..||::..:|
  Fly    44 KVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDS 108

Human    86 IKAAAQWVRDKVGEQGLWALVNNAGV-GLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLPMVK 149
            |:......:.:  :..|..|:||||| ..|    :.||||.:...:.||.:|...:|..:|.::|
  Fly   109 IRKFVDGFKKE--QPKLHVLINNAGVMRCP----KTLTKDGYELQLGVNHIGHFLLTNLLLDVLK 167

Human   150 R-ARGRVVNMSS---SGGRVAVI----------GGGYCVSKFGVEAFSDSIRRELYYFGVKVCII 200
            . |..|:|.:||   :.|.:.|.          |..|..||.....|:..:.:.|...||.|..:
  Fly   168 NSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNAL 232

Human   201 EPG 203
            .||
  Fly   233 HPG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDR9C7NP_683695.1 type2_17beta_HSD-like_SDR_c 26..302 CDD:187665 53/198 (27%)
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 53/198 (27%)

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