Sequence 1: | NP_940980.4 | Gene: | LRRK2 / 120892 | HGNCID: | 18618 | Length: | 2527 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001033958.1 | Gene: | CG33958 / 37088 | FlyBaseID: | FBgn0053958 | Length: | 710 | Species: | Drosophila melanogaster |
Alignment Length: | 505 | Identity: | 94/505 - (18%) |
---|---|---|---|
Similarity: | 165/505 - (32%) | Gaps: | 172/505 - (34%) |
- Green bases have known domain annotations that are detailed below.
Human 2090 GKLPDPVKEYGC------APWPMVEKLIKQCLKENPQERPTSAQVFDILNSAELVCLTRRILLPK 2148
Human 2149 NVIVECMVATHHNSRNASIWLGCGHTDRGQLSFLDLNTEGYTSEEVADS---------------- 2197
Human 2198 ---RILCLALVHLP------------------VEKESWIVSGTQSGTLLVINTEDGK--KRHTLE 2239
Human 2240 KMTDSVTCLYCNSFSKQSKQKNFLLVGTADGKLAIFEDKTVKLKGAAPLKILNIGNVSTPLMCLS 2304
Human 2305 ESTNSTERNVMWGGCGTKIFSFSNDFTIQKLIETRTSQLFSYAAFSDSNIITVVVDTALYIAKQN 2369
Human 2370 SPVVEVWDKKTEKLCGLIDCVHFLREVMVKENKES---KHKMSYSGRVKTLCLQKNTALWIGT-- 2429
Human 2430 -GGGHI--------LLLDLSTRRLIRVIYNFCNSVRVMMTAQLGSLKNVMLVLGYNRKNTEGTQK 2485
Human 2486 QK------EIQSCLTVWDI--NLPHEVQNLEKHIEVRKELAEKMRRTSVE 2527 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRRK2 | NP_940980.4 | Required for RAB29-mediated activation. /evidence=ECO:0000269|PubMed:29212815 | 1..969 | ||
LRR 1 | 983..1004 | ||||
leucine-rich repeat | 985..1012 | CDD:275380 | |||
LRR | 1012..>1286 | CDD:227223 | |||
LRR 2 | 1012..1033 | ||||
leucine-rich repeat | 1013..1036 | CDD:275380 | |||
LRR 3 | 1036..1057 | ||||
leucine-rich repeat | 1037..1084 | CDD:275380 | |||
LRR 4 | 1059..1080 | ||||
LRR 5 | 1084..1105 | ||||
leucine-rich repeat | 1085..1108 | CDD:275380 | |||
LRR 6 | 1108..1129 | ||||
leucine-rich repeat | 1109..1130 | CDD:275380 | |||
LRR 7 | 1130..1150 | ||||
leucine-rich repeat | 1131..1174 | CDD:275380 | |||
LRR 8 | 1174..1196 | ||||
leucine-rich repeat | 1175..1197 | CDD:275380 | |||
LRR 9 | 1197..1218 | ||||
leucine-rich repeat | 1198..1221 | CDD:275380 | |||
LRR 10 | 1221..1241 | ||||
leucine-rich repeat | 1222..1246 | CDD:275380 | |||
LRR 11 | 1246..1267 | ||||
leucine-rich repeat | 1247..1269 | CDD:275380 | |||
LRR 12 | 1269..1291 | ||||
RocCOR | 1334..1507 | CDD:206741 | |||
COR | 1527..1740 | CDD:318343 | |||
STKc_LRRK2 | 1884..2135 | CDD:270970 | 14/50 (28%) | ||
WD 1 | 2139..2183 | 7/43 (16%) | |||
WD 2 | 2188..2228 | 8/76 (11%) | |||
WD 3 | 2233..2276 | 13/44 (30%) | |||
WD 4 | 2281..2327 | 4/45 (9%) | |||
WD 5 | 2333..2377 | 6/43 (14%) | |||
WD 6 | 2402..2438 | 8/49 (16%) | |||
WD 7 | 2443..2497 | 10/59 (17%) | |||
CG33958 | NP_001033958.1 | NIT | 159..396 | CDD:285564 | 54/302 (18%) |
HNOBA | <439..479 | CDD:285003 | |||
CYCc | 459..647 | CDD:214485 | |||
Guanylate_cyc | 485..669 | CDD:278633 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2114 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |