DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bcan and lectin-22C

DIOPT Version :9

Sequence 1:XP_030108256.1 Gene:Bcan / 12032 MGIID:1096385 Length:900 Species:Mus musculus
Sequence 2:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster


Alignment Length:126 Identity:37/126 - (29%)
Similarity:56/126 - (44%) Gaps:15/126 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse   684 GWEAFQGACYKHFS--TRRSWEEAESQCRALGAHLTSICTPEEQDF----VNDRYREYQWIGLND 742
            |:|.. |:.|.:..  :.::|..|...||.:|.||..|  .:|.|.    .|.:...:.|:|:||
  Fly   138 GFEQI-GSKYYYIEKVSEKNWSTASKTCRNMGGHLADI--KDEADLAAIKANLKEDTHYWLGIND 199

Mouse   743 RTIEGDFL-WSDGAPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCK 802
            ...||.|| ...|....:..|..|:|..  |...|||.:.   .|:..|.||:|...:.|:
  Fly   200 LDHEGKFLSMPTGKQTTFLKWASGRPSQ--LDTLNCVFLY---NGEMYDYPCHYTFRFICQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BcanXP_030108256.1 Ig 65..174 CDD:386229
Link_domain_CSPGs_modules_1_3 173..267 CDD:239594
Link_domain_CSPGs_modules_2_4 274..369 CDD:239597
Treacle 499..>635 CDD:367557
EGF 643..672 CDD:333761
CLECT 681..804 CDD:382969 37/126 (29%)
CCP 808..865 CDD:153056
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 33/115 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4956
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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