DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nkx3-2 and bap

DIOPT Version :9

Sequence 1:NP_031550.2 Gene:Nkx3-2 / 12020 MGIID:108015 Length:333 Species:Mus musculus
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:359 Identity:116/359 - (32%)
Similarity:151/359 - (42%) Gaps:98/359 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAVRGSGTLTPFSIQAILNKKE-ERGGLATPEGRPAP------GGTEVAVTAAPAVCCWRIFGET 58
            ||.......|||||..||.:.. |...:::.:..|.|      ...|.:::.:|.:|| |..|..
  Fly    13 MAGLSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCC-RDLGLY 76

Mouse    59 EAGALGGAEDSLLASPARTRTAVGQSAESPGGWDSDSALSEENEGRRRCADVPGASGTGRARVTL 123
            :           |..|..    :..||..|..:....|.:.:|.....     .|:||..:....
  Fly    77 K-----------LTQPKE----IQPSARQPSNYLQYYAAAMDNNNHHH-----QATGTSNSSAAD 121

Mouse   124 GLDQP----GCELHAAKDLEEEAPVRS--DSEMSASVSGDHSPRGEDDSVSPGGARVPGLRGAAG 182
            .:.:.    |..|.|..|:.......|  ||....|.|...||...|                 |
  Fly   122 YMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHD-----------------G 169

Mouse   183 SGASGGQAGGVEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTE 247
            ||.|                  |||||||||||||||||||||..|||||||||:::|.||:|||
  Fly   170 SGLS------------------RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTE 216

Mouse   248 TQVKIWFQNRRYKTKRRQMAADLLASAPAAKKVAVKVLVRDD----------------------- 289
            ||||||||||||||||:|:.....|...|:|:|.|:||||:|                       
  Fly   217 TQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALIN 281

Mouse   290 ----QRQYLPGEVLRPPSLLPLQPSYYYPYYCLP 319
                |.|...|.:..|...:|.  .|:||.:.:|
  Fly   282 IYRHQLQLAYGGLPLPQMQMPF--PYFYPQHKVP 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx3-2NP_031550.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..121 9/46 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..212 19/76 (25%)
Homeobox 209..262 CDD:278475 45/52 (87%)
bapNP_732637.1 Homeobox 178..231 CDD:278475 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6664
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I4673
Isobase 1 0.950 - 0 Normalized mean entropy S5408
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003099
OrthoInspector 1 1.000 - - oto94571
orthoMCL 1 0.900 - - OOG6_108109
Panther 1 1.100 - - O PTHR24340
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4480
SonicParanoid 1 1.000 - - X4759
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.800

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