DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hnrnpd and Hrb87F

DIOPT Version :10

Sequence 1:NP_001070733.1 Gene:Hnrnpd / 11991 MGIID:101947 Length:355 Species:Mus musculus
Sequence 2:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster


Alignment Length:349 Identity:115/349 - (32%)
Similarity:165/349 - (47%) Gaps:71/349 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    66 AKIDASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKL 130
            |:.:.|....|:|...:.|....         |:|||||.:.||...||.:|.|:|.:||..:..
  Fly     2 AEQNDSNGNYDDGEEITEPEQLR---------KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMK 57

Mouse   131 DPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA-KAMKTKEP-----VKKIFVGGL 189
            ||.|.|||||||:.:.:|..:|...:.:.||::|:.::|||| ...:...|     |||:|||||
  Fly    58 DPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGL 122

Mouse   190 SPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEI 254
            ..|..||.:||||..||::.|:.:..|..|.|:|||.||.|.:.:||.||:.:|.|::.....::
  Fly   123 RDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187

Mouse   255 KVAMSKEQYQQQQQWGSRGGFAGRARGRG------------------------------------ 283
            |.|::|:...:|...|.|||  .||.|||                                    
  Fly   188 KKAIAKQDMDRQGGGGGRGG--PRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNS 250

Mouse   284 --------GGPSQNWNQ----GYSNYWNQGYGNYGYNSQGYGGYGGYDYTGY-----NNYYGYGD 331
                    ||.|..|||    |...:.|||.||.|:|..|.|||||.:..|.     ....|.|.
  Fly   251 GGNFGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGG 315

Mouse   332 YSNQ-QSGYGKVSRRGGHQNSYKP 354
            :.|: |..||...:|..:..:.:|
  Fly   316 FGNEYQQSYGGGPQRNSNFGNNRP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnrnpdNP_001070733.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 5/24 (21%)
CBFNT <60..78 CDD:311868 3/11 (27%)
RRM1_hnRNPD 99..172 CDD:410150 31/72 (43%)
RRM2_hnRNPD 183..257 CDD:241027 32/73 (44%)
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 34/76 (45%)
RRM_SF 116..188 CDD:473069 31/71 (44%)

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