Protein Alignment Hnrnpd and CG4612

DIOPT Version :9

• Sequence 1: NP_001070733.1
• Gene: Hnrnpd / 11991
• MGIID: 101947
• Length: 355
• Species: Mus musculus
• Sequence 2: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Alignment Length: 284
• Identity: 79/284 - (27%)
• Similarity: 127/284 - (44%)
• Gaps: 57/284 - (20%)

Mouse     8 GDGAAAA---ATAAVGGSAGEQEGAMVAAAAQGPAAAAGSGSGGGGSAAGGTEGGSAEAEGAKID 69
            |.|.||:   |.|||.|..|.........:....:|..|.|.|||..|:|.| |||.
  Fly    50 GGGHAASNHLAAAAVLGRHGHNSLGSGHTSTSSHSANVGVGVGGGALASGST-GGSG-------- 105

Mouse    70 ASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT 134
                      .||||          :..|::|..|......|.:.|.||.||.:::|.:..|. .
  Fly   106 ----------GNSSP----------DSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-D 149

Mouse   135 GRSRGFGFVLFKESE----SVDKV-----MDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLS 190
            |.|||:|||.|...|    :::||     .:||.|.:  |.| |:|.:..:.....|.::|..||
  Fly   150 GNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVV--KFI-PRRDREQEKATHFKNLYVKNLS 211

Mouse   191 PDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPV---------KKIMEKKYHN 246
            .:..|:.:||.|..:|.:.|.:|.:|.:...|| |.|:.::..:..         |::.:.|:..
  Fly   212 EEFTEQHLREMFEPYGRITSHKLMLDEEGRSRR-FGFVAYENPQSALAAVIGLHGKQLGDNKFLY 275

Mouse   247 V--GLSKCEIKVAMSKEQYQQQQQ 268
            |  .|||.|.:..::::..::::|
  Fly   276 VARALSKAERQQEINRKLEERKRQ 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnrnpd	NP_001070733.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..91		26/85 (31%)
		CBFNT	<60..78	CDD:311868	1/17 (6%)
		RRM1_hnRNPD_like	99..172	CDD:241019	27/81 (33%)
		RRM2_hnRNPD	183..257	CDD:241027	22/84 (26%)
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	23/70 (33%)
		RRM3_I_PABPs	202..282	CDD:240826	20/80 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	1	0.960