DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CLK3 and clk4a

DIOPT Version :9

Sequence 1:NP_001123500.2 Gene:CLK3 / 1198 HGNCID:2071 Length:490 Species:Homo sapiens
Sequence 2:XP_003199888.1 Gene:clk4a / 321857 ZFINID:ZDB-GENE-030131-576 Length:496 Species:Danio rerio


Alignment Length:510 Identity:247/510 - (48%)
Similarity:335/510 - (65%) Gaps:44/510 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MHHCKRYRSP------EPDPYLSYRWKRRR-SYSREHEGRLR---YPSRREPPPRRSRSRSHDRL 55
            |...:|.|||      ..|..:..|.:.|| |:|.|.|.:.|   :..:........:..|::||
Zfish     1 MRQTQRERSPWLRELSLEDRIMETRKRHRRDSHSSERENKYRKHHHHYKNSDGHCLEKRSSNERL 65

Human    56 PYQRRYRERRD---------SDTYRCEERSPSFGEDYYGPSRSRHRRRSRER----------GPY 101
            ....::...||         .|..|..:||         .||.|||.|.|:|          ...
Zfish    66 DTSEKHAVFRDHEHNGYAACKDKERNRDRS---------RSRERHRERERDRDWHHYSKSSGNSM 121

Human   102 RTRKHAH-HCHKRRTRSCSSASSRSQQSSKRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEG 165
            |:.:|.| |.|:|     |...|.|:...::.|||||||:|||||...||.|:.|||||..||||
Zfish   122 RSSRHRHRHRHRR-----SHPHSDSRSHRRKRSRSVEDDEEGHLVYHSGDMLRARYEIVCTLGEG 181

Human   166 TFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 230
            .|||||||:||.:..:::|||||:|:.:||:||..|:.||::|...|.:.::.||.|.|||:.||
Zfish   182 AFGKVVECIDHEKVGARIALKIIKNIERYRDAALSEVEVLEQINSLDCDRRYACVRMYDWFDHHG 246

Human   231 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 295
            |:||||||||.:|::|||||||||:.:.|:||||||:..|:||||:|:|||||||||||||||||
Zfish   247 HICIAFELLGLSTYDFLKENNFQPFYINHIRHMAYQIIRAVRFLHKNKLTHTDLKPENILFVNSE 311

Human   296 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 360
            :...||.....:|::|||..::|.|||:||::|||||::|:|||||.|||||:|||:..|||||:
Zfish   312 YNIRYNSKMKRDERTVKNPDVKVVDFGNATYEHEHHTSVVSTRHYRAPEVILDLGWSHSCDVWSV 376

Human   361 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVK 425
            ||||.|||.|.||||||:::|||.|||::|||||:||:.:|||.::.....|.||.:||.||||:
Zfish   377 GCILIEYYLGSTLFQTHDSKEHLAMMERVLGPIPTHMLQKTRKSRFVRNDKLDWDIHSSSGRYVR 441

Human   426 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 480
            :.||||:.|::..|.:|.|||||:.||||:|..:||||.||:.||||..:...::
Zfish   442 KQCKPLRQYLVSSSSDHEQLFDLIERMLEYDVTKRITLDEAIKHPFFNSIRKSKK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLK3NP_001123500.2 PKc_CLK3 142..472 CDD:271116 197/329 (60%)
clk4aXP_003199888.1 PKc_like 159..488 CDD:304357 196/328 (60%)
S_TKc 172..488 CDD:214567 189/315 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194336399
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D160563at33208
OrthoFinder 1 1.000 - - FOG0000672
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100708
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X440
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.650

Return to query results.
Submit another query.