DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atp5b and ATPsynbeta

DIOPT Version :9

Sequence 1:NP_058054.2 Gene:Atp5b / 11947 MGIID:107801 Length:529 Species:Mus musculus
Sequence 2:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster


Alignment Length:518 Identity:445/518 - (85%)
Similarity:470/518 - (90%) Gaps:11/518 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 ASASASGALRGLSPSAALPQAQLLLRAAPAGVHPARDYAAQASAAPKAGTATGRIVAVIGAVVDV 73
            |..:||.|.:.|.|  .|.|    |..||   ..||.:||:|:.|  |..|.|:|||||||||||
  Fly     3 ALRAASKADKNLLP--FLGQ----LSTAP---FSARSHAAKAAKA--AAAANGKIVAVIGAVVDV 56

Mouse    74 QFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGP 138
            |||:.||||||||||..|..||||||||||||:|||||||||||||||||||||:|.||:||||.
  Fly    57 QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGA 121

Mouse   139 ETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIG 203
            ||||||:|||||||||||||.|.:.|.||||||||::||||||||||||||||||||||||||||
  Fly   122 ETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIG 186

Mouse   204 LFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALV 268
            ||||||||||||||||||||||||||||||||||||||||||||:||||.|||:|||.|||||||
  Fly   187 LFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALV 251

Mouse   269 YGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 333
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   252 YGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 316

Mouse   334 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398
            |||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   317 TLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 381

Mouse   399 DPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463
            ||||||||||||||:|.|||:|||||||||||||||||||||||||||||||||||:||||||||
  Fly   382 DPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 446

Mouse   464 LSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEE 526
            ||||||||||||||.||||||::|||||..||||:||||||.||||||||||.|.|||:||:|
  Fly   447 LSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atp5bNP_058054.2 PRK09280 58..524 CDD:236447 424/465 (91%)
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 423/462 (92%)
ATP-synt_ab_N 46..112 CDD:280947 58/65 (89%)
F1-ATPase_beta 114..393 CDD:238553 263/278 (95%)
ATP-synt_ab_C 401..508 CDD:278722 94/106 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847042
Domainoid 1 1.000 421 1.000 Domainoid score I637
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 841 1.000 Inparanoid score I442
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62497
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - oto91955
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - LDO PTHR15184
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R118
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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