DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurog3 and twi

DIOPT Version :9

Sequence 1:NP_033849.3 Gene:Neurog3 / 11925 MGIID:893591 Length:214 Species:Mus musculus
Sequence 2:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster


Alignment Length:207 Identity:60/207 - (28%)
Similarity:84/207 - (40%) Gaps:41/207 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PHPLDALTIQVSPETQQPFPG-------------ASD--------HEVLSS----NSTPPSPTLI 42
            ||......:......:|.|.|             :||        |..|||    |....||..:
  Fly   256 PHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACL 320

Mouse    43 PRDCSEAEVGDCRGTSRKLRARRGGRNRPK---SELALSKQRRSRRKKANDRERNRMHNLNSALD 104
            ..|.|...:.|  |:....:|.|..|.|.|   |:...:.:..::|..||.|||.|..:||.|..
  Fly   321 ADDGSAGSLLD--GSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFK 383

Mouse   105 ALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSFYGPEPPVPCGELGSPGGGSNGDW 169
            :|:.::||.|.| ||:||:||:.|..||..|.:.|..:|.|..          ......||...:
  Fly   384 SLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLL----------KALEAQGSPSAY 437

Mouse   170 GSIYSPVSQAGN 181
            ||..|.:|.|.|
  Fly   438 GSASSLLSAAAN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog3NP_033849.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..98 31/122 (25%)
HLH 81..140 CDD:238036 25/58 (43%)
twiNP_001033967.1 HLH 363..413 CDD:278439 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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