DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurod4 and cato

DIOPT Version :10

Sequence 1:NP_031527.1 Gene:Neurod4 / 11923 MGIID:108055 Length:330 Species:Mus musculus
Sequence 2:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster


Alignment Length:112 Identity:41/112 - (36%)
Similarity:62/112 - (55%) Gaps:7/112 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    39 GSYGMLGTLTEEHDSIEEDEEEEED----GDKPKRRGPKKKKMTKARLERFRARRVKANARERTR 99
            |:...||.:.|......:.:.:...    |...::..|::..::....:|   ||..||||||.|
  Fly    54 GTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKR---RRQAANARERKR 115

Mouse   100 MHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETG 146
            |:|||.|.:.||.|:|..|..|||||.|||::|::||.||.::|..|
  Fly   116 MNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurod4NP_031527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..80 6/44 (14%)
bHLH_TS_NeuroD4_ATOH3 59..145 CDD:381564 36/89 (40%)
Neuro_bHLH 146..263 CDD:463621 1/1 (100%)
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 32/54 (59%)

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