DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurod6 and CG33557

DIOPT Version :10

Sequence 1:NP_033847.1 Gene:Neurod6 / 11922 MGIID:106593 Length:337 Species:Mus musculus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:111 Identity:37/111 - (33%)
Similarity:53/111 - (47%) Gaps:12/111 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse    51 APGEETEKEEEEEDREEEDENGLSRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALD 115
            |.|.....:.|:....:|...|....:|..:::..          ||:.|||||.|...:|.|.:
  Fly    28 ASGSGAAADSEDSQIGQEANPGGQENQGNHRRRPP----------RQKINARERYRTFNVNSAYE 82

Mouse   116 NLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGK--RPDLL 159
            .||.::|.....:||||||.:|||.:||..||..|..|.  :|.||
  Fly    83 ALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLL 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurod6NP_033847.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..80 6/28 (21%)
Nuclear localization signal. /evidence=ECO:0000255 80..86 0/5 (0%)
bHLH_TS_NeuroD6_ATOH2 82..151 CDD:381565 26/68 (38%)
Neuro_bHLH 153..272 CDD:463621 4/9 (44%)
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 26/53 (49%)

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