DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atoh1 and net

DIOPT Version :10

Sequence 1:NP_031526.1 Gene:Atoh1 / 11921 MGIID:104654 Length:351 Species:Mus musculus
Sequence 2:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster


Alignment Length:212 Identity:55/212 - (25%)
Similarity:93/212 - (43%) Gaps:26/212 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse    19 HHRHPQPHHVPPLTPQPPATLQARDLPVYPAELSLLDSTDPRAWLTPTLQGLCTARAAQYLLHSP 83
            |...|.|.|:  ....|..|...|.|..:|.:|      :|.|.:|...|  |..:|      .|
  Fly   153 HEIMPNPAHI--YVRHPGVTTLHRSLAAHPEQL------EPLALVTTKKQ--CVDQA------GP 201

Mouse    84 ELGASEAAAPRDEADSQGELVRRSGCGGLSKSPGPVKVREQLCKLKGGVVVDELGCSRQRAPSSK 148
            ::.|..|.....:..::..|..|:.....|.|.....:.::        .:::.|.:....|...
  Fly   202 KIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDE--------DLNKTGLAPISRPHQH 258

Mouse   149 QVN--GVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSEL 211
            |.|  .:.::||:.||||||.|:|.::.|::.||..:|::.:.:||||...|::|..||..||.:
  Fly   259 QRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRM 323

Mouse   212 LQTPNVGEQPPPPTASC 228
            .......:|..|..|:|
  Fly   324 AGEDYSADQSVPSIATC 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atoh1NP_031526.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..39 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..116 4/26 (15%)
bHLH_TS_ATOH1 152..215 CDD:381556 24/62 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..278
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..351
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 24/66 (36%)
Blue background indicates that the domain is not in the aligned region.

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