DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atoh1 and HLH3B

DIOPT Version :10

Sequence 1:NP_031526.1 Gene:Atoh1 / 11921 MGIID:104654 Length:351 Species:Mus musculus
Sequence 2:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster


Alignment Length:340 Identity:81/340 - (23%)
Similarity:107/340 - (31%) Gaps:128/340 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse    21 RHPQP---HHVPPLTPQPPATLQARDLPVYPAELSLL-------DSTDPRAWLTPTLQGLCTARA 75
            |||..   |..|.|.|:..:......    .||||..       |..|.|.::  .|.|      
  Fly    52 RHPPALLRHATPHLQPKTESISDGDG----DAELSDFSLNDTEEDEEDLRDYI--VLNG------ 104

Mouse    76 AQYLLHSPELGASEAAAPRDEA--------DSQGELVRRSGCGGLSKSPGPVKVREQLCKLKGGV 132
                 :..:...|.:::||..:        .|.|..|..||.||.:.|.|.       ....||.
  Fly   105 -----NQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGN-------ASSGGGS 157

Mouse   133 VVDELGCSRQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYET 197
            .|...|             ||   |::..|.|||.|...::.||.:||.::|:...||||||.|.
  Fly   158 GVGATG-------------GV---RKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEI 206

Mouse   198 LQMAQIYINALSELLQ---------------TPNVGEQ------------------PPPPTASCK 229
            |:.|..||..|:.:|:               .||..:.                  ||.....|:
  Fly   207 LRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCE 271

Mouse   230 N----------DHHHLRTASSYEGGAGASAVAGAQPA------------PGGGPRPTPPGPCRT- 271
            .          .|.|.      .|.||...:..|..|            |.|.|...||.|..| 
  Fly   272 RTDGQMHRNGIGHGHA------NGNAGNDLLMIAPGAVVKSELLLESTLPLGHPLNGPPLPLTTA 330

Mouse   272 --------RFSGPAS 278
                    |.||..|
  Fly   331 PLAMAETQRISGTVS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atoh1NP_031526.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..39 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..116 9/34 (26%)
bHLH_TS_ATOH1 152..215 CDD:381556 26/77 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..278 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..351
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 24/58 (41%)
Blue background indicates that the domain is not in the aligned region.

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