DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arsa and Sgsh

DIOPT Version :9

Sequence 1:NP_033843.2 Gene:Arsa / 11883 MGIID:88077 Length:506 Species:Mus musculus
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:590 Identity:145/590 - (24%)
Similarity:214/590 - (36%) Gaps:200/590 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 LALAAGLSTASPPNILLIFADDLGYGDLGSYGHPSSTTPNLDQLAEGGLRFTDFYVPVSLCTPSR 72
            |.|.||.| |.|.|:||:.|||.|: :.|:|.:....|||||.||:.||.|.:.:..||.|:|||
  Fly    10 LWLIAGCS-AGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSR 72

Mouse    73 AALLTGRLPVRSGMY---PGV----LGPSSQGGLPLEEVTLAEVLAARGYLTGMAGKWHLGVGPE 130
            :.||||:....||||   .||    :.|.: |.||    .|....:....|:|:.||.|:|....
  Fly    73 SQLLTGQAGHSSGMYGLHQGVHNFNVLPDT-GSLP----NLIRDQSGGRILSGIIGKKHVGAANN 132

Mouse   131 GAFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPDIPCKGGCDQGLVPIPLLANLTVEAQPPWLPG 195
            ..|           ....:.:|.....:.                      .|:|          
  Fly   133 FRF-----------DFEQTEEQHSINQIG----------------------RNIT---------- 154

Mouse   196 LEARYVSFSRDLMADAQRQGRPFFLYYASHHTH-----YPQFSGQSFTKRSGRGPFG-------- 247
               |...::|..:..|:.:.:||||....|..|     .|||.  .|.:|.|.|..|        
  Fly   155 ---RMKEYARQFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFG--EFCERWGSGEEGMGSIPDWK 214

Mouse   248 -----------------------------DSLMELDGAVGALMTTVGDLGLLEETLVIFTADNGP 283
                                         .::..||..||.::..:...|:.::||||:|:||||
  Fly   215 PIYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP 279

Mouse   284 ELMRMSNGGCSGLLRCGKGTTFEGGVREPALVYWPG----HITPGVTHE----LASSLDLLPTLA 340
            ..    .||.:.|        :|.|:|.|.::..|.    |      ||    :.|.||:.|::.
  Fly   280 PF----PGGRTNL--------YEHGIRSPLIISSPNKEDRH------HEATAAMVSLLDIYPSVM 326

Mouse   341 ALTGAPLPNVT-LDGVDISPLLLGTGKSPRK---SVFFYPPYPD--EIHGVFAVRNGKYK----A 395
            .....|.||.| :.|..|.|:|  ..:.|.|   |||....|.:  ..:.:..|||.:||    .
  Fly   327 DALQIPRPNDTKIVGRSILPVL--REEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNI 389

Mouse   396 HFFTQGSAHSDTTSDPACHAANRLTAHEPPL----------------LYDLSQDPGENYNVLESI 444
            :::.......|..:.|........|..:..|                |||:..||.|.:|:.:  
  Fly   390 NYWADFPIDQDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTDPLERFNLAD-- 452

Mouse   445 EGVSPEALQALKHIQLLKAQYDAAMTFGPSQI----AKGEDPALQICCQPSCTPH---------- 495
                             ||:|:..:.....|:    ...:||.       .|.||          
  Fly   453 -----------------KAKYNGTLKQLREQLFDWQVATKDPW-------RCAPHAVLQEQGVYK 493

Mouse   496 --PVC 498
              |||
  Fly   494 DQPVC 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArsaNP_033843.2 AslA 16..440 CDD:225661 127/506 (25%)
ALP_like 19..502 CDD:304875 139/579 (24%)
SgshNP_650760.1 AslA 17..476 CDD:225661 133/552 (24%)
SGSH 22..471 CDD:293751 130/541 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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