DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arsb and Sgsh

DIOPT Version :9

Sequence 1:NP_033842.3 Gene:Arsb / 11881 MGIID:88075 Length:534 Species:Mus musculus
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:605 Identity:138/605 - (22%)
Similarity:221/605 - (36%) Gaps:217/605 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse    27 LQLLLLLLSPARASGATQPPHVVFVLADDLGWNDLGFHGSVIRTPHLDALAAGGVVLDNYYVQ-P 90
            ||.:..|...|..|..  |.:|:.:||||.|:....:.....:||:|||||..|::.:|.:.. .
  Fly     4 LQWIFTLWLIAGCSAG--PQNVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVS 66

Mouse    91 LCTPSRSQLLTGR-------YQIHLGLQHYLIMTCQPSCVPLDEKLLPQLLKEAG---YATHMVG 145
            .|:|||||||||:       |.:|.|:.::.::.        |...||.|:::..   ..:.::|
  Fly    67 SCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNVLP--------DTGSLPNLIRDQSGGRILSGIIG 123

Mouse   146 KWHLGMYRKECLPTRRGFDTYFGYLLGSEDYYTHEACAPIESL--NGTRCALDLRDGEEPAKEYN 208
            |.|:|....            |.:     |:...|....|..:  |.||           .||| 
  Fly   124 KKHVGAANN------------FRF-----DFEQTEEQHSINQIGRNITR-----------MKEY- 159

Mouse   209 NIYSTNIFTKRATTVIANHPPEKPLFLYLAFQSVHDPLQ----VPE--EYMEPYGFIQ------- 260
                ...|.|:|      ...:||.||.:.|   |||.:    .|:  |:.|.:|..:       
  Fly   160 ----ARQFLKQA------KDEKKPFFLMVGF---HDPHRCGHITPQFGEFCERWGSGEEGMGSIP 211

Mouse   261 ---------------------DKHRRIYAGM---VSLMDEAVGNVTKALKSHGLWNNTVFIFSTD 301
                                 |..|:..|..   :|.:|:.||.:.|.|::.|:.:.|:.|:::|
  Fly   212 DWKPIYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSD 276

Mouse   302 NGGQTRSGGNNWPLRGRKGTLWEGGIRGTGFVASPLLKQKGVKSRELM-HITDWLPTLVD-LAGG 364
            ||.         |..|.:..|:|.|||....::||..:.:..::...| .:.|..|:::| |...
  Fly   277 NGP---------PFPGGRTNLYEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIP 332

Mouse   365 STNGTK--------------PLD------GFNMWKTISEGHP-----SPRVELLHN--------I 396
            ..|.||              |:.      |.:.:..::..:|     :.|.:|:||        |
  Fly   333 RPNDTKIVGRSILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPI 397

Mouse   397 DQDFFDGLPCPGKNMTPAKDDSFPLEHSAFNTSIHAGIRYKN--W--KLLTGHPGCGYWFPPPSQ 457
            ||||:..                    ..|...::|.:|.:.  |  .||.      |:..|.  
  Fly   398 DQDFYTS--------------------PTFQQILNATLRKQTLPWYRSLLQ------YYQRPE-- 434

Mouse   458 SNVSEIPPVDPPTKTLW-LFDINQDPEERHDVSREHPHIVQNLLSRLQY------YHEHSVPSHF 515
                            | |:||..||.||.           ||..:.:|      ..|.......
  Fly   435 ----------------WELYDIKTDPLERF-----------NLADKAKYNGTLKQLREQLFDWQV 472

Mouse   516 PPLDP-RCDP----KSTGVW 530
            ...|| ||.|    :..||:
  Fly   473 ATKDPWRCAPHAVLQEQGVY 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArsbNP_033842.3 AslA 42..490 CDD:225661 122/537 (23%)
4-S 46..489 CDD:293753 121/532 (23%)
SgshNP_650760.1 AslA 17..476 CDD:225661 127/574 (22%)
SGSH 22..471 CDD:293751 125/562 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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