DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arx and al

DIOPT Version :9

Sequence 1:NP_001292869.1 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:422 Identity:140/422 - (33%)
Similarity:182/422 - (43%) Gaps:138/422 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse   239 EEELLED--DDEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAVATEGGELSPKEELLLHP 301
            ||..||:  .:.:|...||..|:..      |...:.|:|.||...:::..||.          |
  Fly     5 EEIKLEELPQEAKLAHPDAVVLVDR------APGSSAASAGAALTVSMSVSGGA----------P 53

Mouse   302 EDAEGKDGEDSVCLSAGS---DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREEL 363
            ..|.|..|..:..:|.|:   :::|...|||||||||||||:||||||:||.:||||||||||||
  Fly    54 SGASGASGGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREEL 118

Mouse   364 AMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPG------------------------ 404
            ||::.|||||:|||||||||||||:||.|.|:||.....||                        
  Fly   119 AMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQ 183

Mouse   405 ---PLSATHPLS------PYLDASPF------------PPH---H-------------------- 425
               |..|.|..:      |:|.|:|.            |||   |                    
  Fly   184 LRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMT 248

Mouse   426 -----------PA--------------LDSAWTAAAAAAAA---AFPSLPPPPGSASLPPSGAPL 462
                       ||              |.|..|:.|:..|:   ..|:..|||..|  ||. .|:
  Fly   249 AVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQA--PPQ-MPV 310

Mouse   463 GLSTFLGAAVFRHPAFISP------AFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALAD 521
            |:          .||.:||      |..:..|:::|..::..|..|...|...:...........
  Fly   311 GV----------QPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPP 365

Mouse   522 P--ATAAADRRASSIAALRLKAKEHAAQLTQL 551
            |  ||...|||.||||||||||:||..:|..|
  Fly   366 PRAATPPEDRRTSSIAALRLKAREHELKLELL 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArxNP_001292869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 8/26 (31%)
Homeobox 334..386 CDD:278475 43/51 (84%)
OAR 528..545 CDD:281777 14/16 (88%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 11/12 (92%)
alNP_722629.1 Homeobox 89..141 CDD:278475 43/51 (84%)
OAR 374..391 CDD:281777 14/16 (88%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 110 1.000 Domainoid score I6339
eggNOG 1 0.900 - - E33208_3BSUU
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42357
orthoMCL 1 0.900 - - OOG6_108797
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5874
SonicParanoid 1 1.000 - - X3639
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.850

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