DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ranbp16 and Ranbp17

DIOPT Version :10

Sequence 1:NP_001188596.1 Gene:Ranbp16 / 118436 FlyBaseID:FBgn0053180 Length:1110 Species:Drosophila melanogaster
Sequence 2:NP_001349804.1 Gene:Ranbp17 / 66011 MGIID:1929706 Length:1108 Species:Mus musculus


Alignment Length:1100 Identity:583/1100 - (53%)
Similarity:777/1100 - (70%) Gaps:41/1100 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQQLEVLCKQLYEATDIRIRSEAEKALVTFVSSQDALPKCQLLLQRADSSYAQLLAASTLTKL-- 65
            :.:|||||..||..||:..|.||||||:..:.|.:.|.||||||::..:||||||||:.|:||  
Mouse     8 LAELEVLCTHLYVGTDLTERIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVT 72

  Fly    66 -IQGLSLQERIDIRSYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFDSYKEEMVFQNLLEDVK 129
             |..|.:::|||||:|.|||:|:.|.|..||:|||:.::|||||.|||:..|:|.||:.::.|||
Mouse    73 RINPLPIEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKLTKLGWFEVQKDEFVFREIIADVK 137

  Fly   130 KFLQGSVEHCTIGVQILSQLVCEMNSVVEMDVQVSFSKMRKIATSFRDQQLLETFLLSCSLLVSA 194
            |||||:||||.|||.||.:|..|||.|   |.....:|.|||||||||..|.:..:|:||||...
Mouse   138 KFLQGTVEHCIIGVIILCELTQEMNLV---DYSRPSAKHRKIATSFRDTSLKDILVLACSLLKQV 199

  Fly   195 RDNSKNISFMDESQQALISHVLRLTKNCLSFDFIGSSTDESADDMNNVQIPTAWRPAFLDSNTLK 259
            .  :|.::..|:.||:|:..||:|..:||:|||:|||.||||||:..|||||.||..||:..||.
Mouse   200 L--AKPLNLQDQDQQSLVMQVLKLVLSCLNFDFLGSSADESADDLCTVQIPTTWRTIFLEPETLD 262

  Fly   260 LFFDLYQILPNGLASYSISCLVQITSVRRSLFNNSERTKFLTHLVEGVKDILTTLHGLSDPDNYH 324
            |||:||..||..|:..::|||||..|.|||||::.||.|:|.:|::|||.||....|||||.|||
Mouse   263 LFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYH 327

  Fly   325 EFCRLLARLKSNYQLGELIAVPCYPEAIQLIAKFTVESLHLWLFAPNSVHYLLTLWQRMVASVPY 389
            ||||.|||||:|||||||:.|..|.|.|.|||.||:.||..|.|||||||||||||||||||||:
Mouse   328 EFCRFLARLKTNYQLGELVLVKEYAEVIGLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPF 392

  Fly   390 VKSPDPHLLGTYTPEVIKAYIESRLDAVPVIIRDNLDDPLDDFCMVQQQLEQLSVIERCEYNKTC 454
            |||.:||||.||.||:.||:|.|||::|.:::||||:|||||...|.||||||..:.||||.|||
Mouse   393 VKSAEPHLLDTYAPEITKAFITSRLESVAIVVRDNLEDPLDDTATVFQQLEQLCTVSRCEYEKTC 457

  Fly   455 NLLVQHFDQKAREYENLLQTPNANSIDITIHELQLTWLVYIIGSAIVGRLTVATSDEHDTMDAEL 519
            .||||.|||.|:.|:.||......::|:.|.|.:|.||:|::|:.:.||||..::||||.||.||
Mouse   458 TLLVQLFDQNAQNYQKLLHAAPGLAVDMAIQEGRLAWLIYLVGTVVGGRLTYTSTDEHDAMDGEL 522

  Fly   520 VIRVLQLMTLTDARLPQAGCEKLELAILSFLDQVRKMHSSEQAQKAN------------------ 566
            ..||.||::|.|.|||....||:|||:|.||||.||.:..:|.|:.:                  
Mouse   523 SCRVFQLISLMDTRLPHCTNEKIELAVLWFLDQFRKTYVGDQLQRTSKVVRPKNDVSRVPEKAWK 587

  Fly   567 ---LNKRLSEVFGLTDEQMLLSFINRKIITNLKFWGRSESIITKTLMLLSELSVHFNSVRKLARL 628
               :..|:|||.|:||:..:|.....||:||||:|||.|.:|::||..||:|||.:..::||.::
Mouse   588 IVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLSDLSVGYILLKKLVKI 652

  Fly   629 EEVQFMLTHHTSEHFPFLGTNS--SLSEMRCRTMFYTSLGRLLMFDLGEDEERFYNFLEPLTNQF 691
            :.|:|||.:||||||||||.:.  ::.:.||||.|||:|.||||.||||||:.|.||:.|||..|
Mouse   653 DAVKFMLKNHTSEHFPFLGISETYNVGDFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVSF 717

  Fly   692 ESLGSVMMDNNIFSNEEAKKVIIGLARDLRGLALPLNARIQYTMLFEWLYYADYLPILLRAMDLW 756
            |::  :.:.||.|..||.|:::|||||||||:|..||.:..|||||:|:|.| |||:|.||::.|
Mouse   718 ETV--LQIFNNNFKQEEVKRMLIGLARDLRGIAFALNTKTSYTMLFDWIYPA-YLPVLQRAIERW 779

  Fly   757 AHDPAVTTPILKLFAELVHCRTQRLAGNVSSPMGILLFREASKLICIYGNRILH-QEVPRERLYP 820
            ..:||.|||||||.|||:..|:|||..:||||.||||||||||:||.|||:||. ..:.::::||
Mouse   780 YGEPACTTPILKLLAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDKIYP 844

  Fly   821 MRLKGIAICFLILKNSLGGNYVNCGVFKLYGDDTLDSVLNIIAKLILTIEQRDLIEYPKLSTAYY 885
            |:||||:||:..||::|.||||:.||||||||:..|:||....|::|::...||::|.|||.:||
Mouse   845 MKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYY 909

  Fly   886 NLLNCLSQDHVSYLAALEPAAFVYILKSLTKGLAALDSATYISCCTILDSIVSYIFKQLQMKVST 950
            .||.||:|||:|::..|||...:|:|.||::||..||:....||||.||.:|:|:||.:..:   
Mouse   910 PLLECLTQDHMSFITNLEPPVLLYVLTSLSEGLTTLDTVVSSSCCTSLDYMVTYLFKHIAKE--- 971

  Fly   951 FPNKKLRSLN--QENVQFLKVVEMNSELLQSMMSSLLNNVLQEDCRNQWSMSRPLLVLILLYEDY 1013
             ..|.|||..  |...:.|..::.|.::||.|||.|:|.::.||||||||:|||||.||||.|.|
Mouse   972 -GKKPLRSREAMQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKY 1035

  Fly  1014 YRSLKDRIICAQPIEKQQTMAQWFDDLMVGIERNVSSKNKEKFTQNMSTFRRDVVNLPKS 1073
            :..|:..:|.:||:.||:.:.|.|.:||.|:|:|:|.||:::||||:|.|||||....:|
Mouse  1036 FSELRASLINSQPLPKQEVLGQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRS 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp16NP_001188596.1 IBN_N 25..87 CDD:197981 35/64 (55%)
Ranbp17NP_001349804.1 CRM1 8..>167 CDD:227432 89/161 (55%)
IBN_N 30..95 CDD:197981 35/64 (55%)

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