DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp16 and Xpo7

DIOPT Version :10

Sequence 1:NP_001188596.1 Gene:Ranbp16 / 118436 FlyBaseID:FBgn0053180 Length:1110 Species:Drosophila melanogaster
Sequence 2:XP_006519422.1 Gene:Xpo7 / 65246 MGIID:1929705 Length:1097 Species:Mus musculus


Alignment Length:1091 Identity:636/1091 - (58%)
Similarity:822/1091 - (75%) Gaps:22/1091 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQQLEVLCKQLYEATDIRIRSEAEKALVTFVSSQDALPKCQLLLQRADSSYAQLLAASTLTKLI- 66
            :.|||.|||||||.||...|.:||||||.|.:|.|.|.||||||:|..|||:|||||:.||||: 
Mouse     9 LAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAATCLTKLVS 73

  Fly    67 ---QGLSLQERIDIRSYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFDSYKEEMVFQNLLEDV 128
               ..|.|::|||||:|.||||||.|.|..||.|||:.|.|::||.||||..|::.||:|.:.||
Mouse    74 RTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQKDDYVFRNAITDV 138

  Fly   129 KKFLQGSVEHCTIGVQILSQLVCEMNSV------VEMDVQVSFSKMRKIATSFRDQQLLETFLLS 187
            .:|||.|||:|.|||.|||||..|:|.|      :|.|.....:|.||||:||||..|.:.|.||
Mouse   139 TRFLQDSVEYCIIGVTILSQLTNEINQVSATAFLIEADTTHPLTKHRKIASSFRDSSLFDIFTLS 203

  Fly   188 CSLLVSARDNSKNISFMDESQQALISHVLRLTKNCLSFDFIGSSTDESADDMNNVQIPTAWRPAF 252
            |:||..|  :.||::..||||..|:..:|:||.|||:|||||:|||||:||:..|||||:||.||
Mouse   204 CNLLKQA--SGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCTVQIPTSWRSAF 266

  Fly   253 LDSNTLKLFFDLYQILPNGLASYSISCLVQITSVRRSLFNNSERTKFLTHLVEGVKDILTTLHGL 317
            |||:||:||||||..:|...:...:||||||.|||||||||:||.|||:|||:|||.||.....|
Mouse   267 LDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAERAKFLSHLVDGVKRILENPQSL 331

  Fly   318 SDPDNYHEFCRLLARLKSNYQLGELIAVPCYPEAIQLIAKFTVESLHLWLFAPNSVHYLLTLWQR 382
            |||:|||||||||||||||||||||:.|..||:.|:|||.|||.||..|.||||||||||:||||
Mouse   332 SDPNNYHEFCRLLARLKSNYQLGELVKVENYPDVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQR 396

  Fly   383 MVASVPYVKSPDPHLLGTYTPEVIKAYIESRLDAVPVIIRDNLDDPLDDFCMVQQQLEQLSVIER 447
            :.|||||||:.:||:|.||||||.||||.|||::|.:|:||.|:|||:|..:|||||:|||.|.|
Mouse   397 LAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGR 461

  Fly   448 CEYNKTCNLLVQHFDQKAREYENLLQTPNANSIDITIHELQLTWLVYIIGSAIVGRLTVATSDEH 512
            |||.|||.||||.|||.|:.|:.|||:.:|:.:||.:.|.:|||||||||:.|.||::.|::||.
Mouse   462 CEYEKTCALLVQLFDQSAQSYQELLQSASASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQ 526

  Fly   513 DTMDAELVIRVLQLMTLTDARLPQAGCEKLELAILSFLDQVRKMHSSEQAQKAN-LNKRLSEVFG 576
            |.||.|||.||||||.|||:||.|||.||||||:|||.:|.||::..:|.||:: |.:|||||.|
Mouse   527 DAMDGELVCRVLQLMNLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLG 591

  Fly   577 LTDEQMLLSFINRKIITNLKFWGRSESIITKTLMLLSELSVHFNSVRKLARLEEVQFMLTHHTSE 641
            |.||.|:||....|:|||||:|||.|.|.:|||.||::||:.::|||||.:|..|||||.:||||
Mouse   592 LNDETMVLSVFIGKVITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSE 656

  Fly   642 HFPFLGTN--SSLSEMRCRTMFYTSLGRLLMFDLGEDEERFYNFLEPLTNQFESLGSVMMDNNIF 704
            ||.|||.|  |:|::|||||.|||:||||||.||||||:::..|:.|||..||::.. |...|.|
Mouse   657 HFSFLGINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQ-MFSTNSF 720

  Fly   705 SNEEAKKVIIGLARDLRGLALPLNARIQYTMLFEWLYYADYLPILLRAMDLWAHDPAVTTPILKL 769
            :.:|||:.::||.|||||:|...||:..:.|||||: |..|:|||.||::||.||||.|||:|||
Mouse   721 NEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWI-YPSYMPILQRAIELWYHDPACTTPVLKL 784

  Fly   770 FAELVHCRTQRLAGNVSSPMGILLFREASKLICIYGNRILH-QEVPRERLYPMRLKGIAICFLIL 833
            .|||||.|:|||..:||||.|||||||.||:|.:||||||. .|||::::|.::||||:|||.:|
Mouse   785 MAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSML 849

  Fly   834 KNSLGGNYVNCGVFKLYGDDTLDSVLNIIAKLILTIEQRDLIEYPKLSTAYYNLLNCLSQDHVSY 898
            |.:|.|:|||.|||:|||||.|::.|....||:|:|...||::|||||.:||:||..|:|||:::
Mouse   850 KAALSGSYVNFGVFRLYGDDALENALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNF 914

  Fly   899 LAALEPAAFVYILKSLTKGLAALDSATYISCCTILDSIVSYIFKQLQMKVSTFPNKKLRSLNQEN 963
            :|:|||...:|||.|:::||.|||:.....||:.||.||:|:||||    |....|:...||:|:
Mouse   915 IASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQL----SRSTKKRTTPLNRES 975

  Fly   964 VQFLKVVEMNSELLQSMMSSLLNNVLQEDCRNQWSMSRPLLVLILLYEDYYRSLKDRIICAQPIE 1028
            ..||.:::.:..::|.|:|::||.::.||||||||||||||.||||.|.|:..|::.|:.:||.|
Mouse   976 DCFLHIMQQHPAMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSIVNSQPPE 1040

  Fly  1029 KQQTMAQWFDDLMVGIERNVSSKNKEKFTQNMSTFRRDVVNLPKSTAGGAD 1079
            |||.|...|::||.|||||:.:||:::||||:|.|||:|.:..|::..|.:
Mouse  1041 KQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGVN 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp16NP_001188596.1 IBN_N 25..87 CDD:197981 41/65 (63%)
Xpo7XP_006519422.1 CRM1 30..>315 CDD:227432 166/286 (58%)
IBN_N 31..97 CDD:197981 41/65 (63%)

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