DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp16 and xpo7

DIOPT Version :9

Sequence 1:NP_001188596.1 Gene:Ranbp16 / 118436 FlyBaseID:FBgn0053180 Length:1110 Species:Drosophila melanogaster
Sequence 2:XP_005155352.1 Gene:xpo7 / 407710 ZFINID:ZDB-GENE-060628-2 Length:1090 Species:Danio rerio


Alignment Length:1085 Identity:639/1085 - (58%)
Similarity:824/1085 - (75%) Gaps:16/1085 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQQLEVLCKQLYEATDIRIRSEAEKALVTFVSSQDALPKCQLLLQRADSSYAQLLAASTLTKLI- 66
            :.|||:|||||||.||...|.:||||||.|.:|.|.|.||||||:|..|||:|||||:.|:||: 
Zfish     8 LAQLEILCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAATCLSKLVS 72

  Fly    67 ---QGLSLQERIDIRSYALNYLATVPNLQHFVVQALVSLLAKLTKYGWFDSYKEEMVFQNLLEDV 128
               ..|.|::|||||:|.||||||.|.|..||.|||:.|.|::||.||||..||:.||:|::.||
Zfish    73 RTSNPLPLEQRIDIRNYVLNYLATRPKLAAFVTQALIQLYARITKLGWFDCQKEDYVFRNVIVDV 137

  Fly   129 KKFLQGSVEHCTIGVQILSQLVCEMNSVVEMDVQVSFSKMRKIATSFRDQQLLETFLLSCSLLVS 193
            .:|||.|||||.|||.|||||..|:|.|::.|.....:|.||||:||||..|.:.|.|||:||..
Zfish   138 TRFLQDSVEHCIIGVTILSQLTNEINQVLQADSTHPLTKHRKIASSFRDSSLFDIFTLSCNLLKQ 202

  Fly   194 ARDNSKNISFMDESQQALISHVLRLTKNCLSFDFIGSSTDESADDMNNVQIPTAWRPAFLDSNTL 258
            |  :.||::..||||..|:..:|:|..|||:|||||:|||||:||:..|||||:||.|||||:||
Zfish   203 A--SGKNLNLNDESQHGLLMQLLKLAHNCLNFDFIGTSTDESSDDLCTVQIPTSWRSAFLDSSTL 265

  Fly   259 KLFFDLYQILPNGLASYSISCLVQITSVRRSLFNNSERTKFLTHLVEGVKDILTTLHGLSDPDNY 323
            :||||||..:|..|:...:||||||.|||||||||:||.|||:|||:|||.||.....||||:||
Zfish   266 QLFFDLYHSIPPSLSPLVLSCLVQIASVRRSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNY 330

  Fly   324 HEFCRLLARLKSNYQLGELIAVPCYPEAIQLIAKFTVESLHLWLFAPNSVHYLLTLWQRMVASVP 388
            |||||||||||||||||||:.|..|||.|:|||.|||.||..|.||||||||||:||||:.||||
Zfish   331 HEFCRLLARLKSNYQLGELVKVDNYPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVP 395

  Fly   389 YVKSPDPHLLGTYTPEVIKAYIESRLDAVPVIIRDNLDDPLDDFCMVQQQLEQLSVIERCEYNKT 453
            |||:.:||:|.||||||.||||.|||::|.:|:||.|:|||||..:|||||:|||.|.||||.||
Zfish   396 YVKATEPHMLETYTPEVTKAYITSRLESVHIILRDGLEDPLDDAGLVQQQLDQLSTIGRCEYEKT 460

  Fly   454 CNLLVQHFDQKAREYENLLQTPNANSIDITIHELQLTWLVYIIGSAIVGRLTVATSDEHDTMDAE 518
            |.||||.|||.|:.|:.|||:.|::::||.:.|.:|||||||||:.|.||::.|::||.|.||.|
Zfish   461 CALLVQLFDQSAQSYQELLQSTNSSTMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGE 525

  Fly   519 LVIRVLQLMTLTDARLPQAGCEKLELAILSFLDQVRKMHSSEQAQKAN-LNKRLSEVFGLTDEQM 582
            ||.||||||.|||:||.|||.||||||:|||.:|.||::..:|.||:: |.:|||||.||.||.|
Zfish   526 LVCRVLQLMNLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETM 590

  Fly   583 LLSFINRKIITNLKFWGRSESIITKTLMLLSELSVHFNSVRKLARLEEVQFMLTHHTSEHFPFLG 647
            :||....|||||||:||:.|.|.:|||.||::||:.::|||||.:|..|||||.:||||||.|||
Zfish   591 VLSVFIGKIITNLKYWGQCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLG 655

  Fly   648 TN--SSLSEMRCRTMFYTSLGRLLMFDLGEDEERFYNFLEPLTNQFESLGSVMMDNNIFSNEEAK 710
            .|  ::||:|||||.|||:||||||.||||||::|..|:.|||..||::.. |...|.|:.:|||
Zfish   656 VNNQANLSDMRCRTTFYTALGRLLMVDLGEDEDQFEQFMLPLTAAFEAVAQ-MFSTNTFNEQEAK 719

  Fly   711 KVIIGLARDLRGLALPLNARIQYTMLFEWLYYADYLPILLRAMDLWAHDPAVTTPILKLFAELVH 775
            :.::||.|||||:|...||:..:.|||:|: |..|:|||.||::||.|.||.|||:|||.|||||
Zfish   720 RTLVGLVRDLRGIAFAFNAKTSFMMLFDWI-YPSYMPILQRAIELWYHVPACTTPVLKLMAELVH 783

  Fly   776 CRTQRLAGNVSSPMGILLFREASKLICIYGNRILH-QEVPRERLYPMRLKGIAICFLILKNSLGG 839
            .|:|||..:||||.|||||||.||:|..||||||. .|||::::|.::||||:|||.:||..|.|
Zfish   784 NRSQRLQFDVSSPNGILLFRETSKMITTYGNRILTLGEVPKDQVYALKLKGISICFSMLKAVLSG 848

  Fly   840 NYVNCGVFKLYGDDTLDSVLNIIAKLILTIEQRDLIEYPKLSTAYYNLLNCLSQDHVSYLAALEP 904
            ||||.|||:|||||.||:.|....||:|:|...||::|||||.:||:||..|:|||::::|:|||
Zfish   849 NYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFIASLEP 913

  Fly   905 AAFVYILKSLTKGLAALDSATYISCCTILDSIVSYIFKQLQMKVSTFPNKKLRSLNQENVQFLKV 969
            ...:|||.|:::||.|||:.....||:.||.||:|:||||    |....|::..:.||:.:||.:
Zfish   914 HVVMYILSSISEGLTALDTMVCTGCCSSLDHIVTYLFKQL----SRSTKKRVAPMAQESDRFLHI 974

  Fly   970 VEMNSELLQSMMSSLLNNVLQEDCRNQWSMSRPLLVLILLYEDYYRSLKDRIICAQPIEKQQTMA 1034
            ::.:.|::|.|:|::||.::.||||||||||||||.||||.|.|:..|::.|:.:||.||||.|.
Zfish   975 MQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFADLRNSIVNSQPPEKQQAMH 1039

  Fly  1035 QWFDDLMVGIERNVSSKNKEKFTQNMSTFRRDVVNLPKSTAGGAD 1079
            ..|::||.|||||:.:||:::||||:|.|||:|.:..|::..|.:
Zfish  1040 LCFENLMEGIERNLLTKNRDRFTQNLSVFRREVNDSMKNSTYGVN 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp16NP_001188596.1 IBN_N 25..87 CDD:281761 40/65 (62%)
xpo7XP_005155352.1 IBN_N 30..96 CDD:281761 40/65 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594998
Domainoid 1 1.000 1119 1.000 Domainoid score I19
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22857
Inparanoid 1 1.050 1238 1.000 Inparanoid score I176
OMA 1 1.010 - - QHG53933
OrthoDB 1 1.010 - - D198413at2759
OrthoFinder 1 1.000 - - FOG0004030
OrthoInspector 1 1.000 - - oto41734
orthoMCL 1 0.900 - - OOG6_102412
Panther 1 1.100 - - LDO PTHR12596
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3705
SonicParanoid 1 1.000 - - X2778
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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