DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Arf2 and Arf102F

DIOPT Version :9

Sequence 1:	NP_001291503.1	Gene:	Arf2 / 11841	MGIID:	99595	Length:	181	Species:	Mus musculus
Sequence 2:	NP_001259087.1	Gene:	Arf102F / 43823	FlyBaseID:	FBgn0013749	Length:	180	Species:	Drosophila melanogaster

Alignment Length:	177	Identity:	145/177 - (81%)
Similarity:	154/177 - (87%)	Gaps:	0/177 - (0%)

- Green bases have known domain annotations that are detailed below.

Mouse     1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||.....|...|||||:||||||||||||||||||||||||||||||||||||||||||||.|||
  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65

Mouse    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDL 130
            ||||||||||||||||||||||||||||||||:|:.||..||..||.||||||||||||.|||||
  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130

Mouse   131 PNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQL 177
            ||||.|||:||||.|:.||.|:|:||:||||.|.||||||||||.:|
  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arf2	NP_001291503.1	YlqF_related_GTPase	1..180	CDD:424112	145/177 (82%)
Arf102F	NP_001259087.1	YlqF_related_GTPase	1..180	CDD:424112	145/177 (82%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0070
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53833
OrthoDB	1	1.010	-	-		D1362554at2759
OrthoFinder	1	1.000	-	-		FOG0000118
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.830