DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLCN5 and GEF1

DIOPT Version :10

Sequence 1:NP_001427685.1 Gene:CLCN5 / 1184 HGNCID:2023 Length:820 Species:Homo sapiens
Sequence 2:NP_012574.1 Gene:GEF1 / 853497 SGDID:S000003801 Length:779 Species:Saccharomyces cerevisiae


Alignment Length:800 Identity:252/800 - (31%)
Similarity:419/800 - (52%) Gaps:114/800 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    48 PLDREVGGIIIEDKSYNGGGIGSSNRIMDFLEEPIPGVGTYDDFNTIDWVREKSR--DRDRHREI 110
            |:::.:|         :|..:..:||..:     ||....:|.|.|||.:.|::|  ..|..||.
Yeast     7 PINQPIG---------DGEDVIDTNRFTN-----IPETQNFDQFVTIDKIAEENRPLSVDSDREF 57

Human   111 TNKS----KESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKEGICTGGFWFN 171
            .|..    :|..|       |....::.:....::.|.:||.:.:....:.:.|.|.|...:..|
Yeast    58 LNSKYRHYREVIW-------DRAKTFITLSSTAIVIGCIAGFLQVFTETLVNWKTGHCQRNWLLN 115

Human   172 HEHCC-------WNSEHVTFEERD-KCPE---WNSWSQLIISTDEGAFAYIVNYFMYVLWALLFA 225
            ...||       .::.::..:.:: :|..   |.:|.           .::..:.:::|.::|||
Yeast   116 KSFCCNGVVNEVTSTSNLLLKRQEFECEAQGLWIAWK-----------GHVSPFIIFMLLSVLFA 169

Human   226 FLAVSLVKVFAPYACGSGIPEIKTILSGF-IIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLV 289
            .::..|||..||.|.||||.|||..:||| ..:.:||..|||||::.|.||:|||||:|||||.|
Yeast   170 LISTLLVKYVAPMATGSGISEIKVWVSGFEYNKEFLGFLTLVIKSVALPLAISSGLSVGKEGPSV 234

Human   290 HVACCCGNILCHCFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEV--SYYFPLKTL 352
            |.|.|||.:|.....:.....:.:.|.::||:.|||:||||||||||||.|||:  :..|...||
Yeast   235 HYATCCGYLLTKWLLRDTLTYSSQYEYITAASGAGVAVAFGAPIGGVLFGLEEIASANRFNSSTL 299

Human   353 WRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAW 417
            |:|::.||||..||:.|:||.|.|::||.|.:...|.:.|:..||.|||||||:|....:.||.:
Yeast   300 WKSYYVALVAITTLKYIDPFRNGRVILFNVTYDRDWKVQEIPIFIALGIFGGLYGKYISKWNINF 364

Human   418 CRKRKTTQLGKYPVIEVLVVTAITAILAFPNEYTRMSTSELISELFNDCGLLD-----SSKLCDY 477
            ...|| ..|..:||.|||.:..:||::::.||:.::..:|.:..||::|...|     |.:||  
Yeast   365 IHFRK-MYLSSWPVQEVLFLATLTALISYFNEFLKLDMTESMGILFHECVKNDNTSTFSHRLC-- 426

Human   478 ENRFNTSKGGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRL 542
                      :|.:.............|....:::.::.:.::|.::|:|:|:|||||||..||.
Yeast   427 ----------QLDENTHAFEFLKIFTSLCFATVIRALLVVVSYGARVPAGIFVPSMAVGATFGRA 481

Human   543 LGVGMEQLAYYHQEWTVFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLE 607
            :.:.:|:..              .|...||||.||.:||||.|.|:|.:|:::|||||||||...
Yeast   482 VSLLVERFI--------------SGPSVITPGAYAFLGAAATLSGITNLTLTVVVIMFELTGAFM 532

Human   608 YIVPLMAAAMTSKWVADALG-REGIYDAHIRLNGYPFL-----EAKEEFAHKTLAMDVMKPRRND 666
            ||:|||.....::.:....| ..||.|..|.:||:|:|     |.:||...|..|..:|..:   
Yeast   533 YIIPLMIVVAITRIILSTSGISGGIADQMIMVNGFPYLEDEQDEEEEETLEKYTAEQLMSSK--- 594

Human   667 PLLTVLTQDSMTVEDVETII----SETTYSGFPVVVSRE----SQRLVGFVLRRDLIISI----E 719
             |:|:  .:::.:.::|:::    ||.:..|||:....:    .:|.:|:||:|.|...|    .
Yeast   595 -LITI--NETIYLSELESLLYDSASEYSVHGFPITKDEDKFEKEKRCIGYVLKRHLASKIMMQSV 656

Human   720 NARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQ 784
            |:.|.|     |:::||.:.:..| .:....:..::|::.||.:|....|:.::..:|::||.:.
Yeast   657 NSTKAQ-----TTLVYFNKSNEEL-GHRENCIGFKDIMNESPISVKKAVPVTLLFRMFKELGCKT 715

Human   785 CLVTHNGRLLGIITKKDVLK 804
            .:|..:|.|.|::|.||:|:
Yeast   716 IIVEESGILKGLVTAKDILR 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLCN5NP_001427685.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Selectivity filter part_1. /evidence=ECO:0000250 241..245 3/3 (100%)
Selectivity filter part_2. /evidence=ECO:0000250 283..287 3/3 (100%)
Selectivity filter part_3. /evidence=ECO:0000250 527..531 2/3 (67%)
GEF1NP_012574.1 ClC_3_like 83..569 CDD:239656 185/523 (35%)
CBS_pair_voltage-gated_CLC_euk_bac 586..736 CDD:341367 40/161 (25%)
CBS repeat 592..687 CDD:341367 22/106 (21%)
CBS repeat 693..735 CDD:341367 12/41 (29%)
Blue background indicates that the domain is not in the aligned region.

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