DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CLCN5 and clcn5

DIOPT Version :10

Sequence 1:NP_001427685.1 Gene:CLCN5 / 1184 HGNCID:2023 Length:820 Species:Homo sapiens
Sequence 2:NP_001039210.1 Gene:clcn5 / 734069 XenbaseID:XB-GENE-5957241 Length:808 Species:Xenopus tropicalis


Alignment Length:813 Identity:669/813 - (82%)
Similarity:743/813 - (91%) Gaps:5/813 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 MDNRGFQQGSFSSFQNSSSDEDLMDIPATAMDFSMRDDVPPLDREVGGIIIEDKSYNGGGIGSSN 72
            |||:||::.|.:||.:|:||||:::|....:||:|.|||||:||::.|..:   ||||.|:...:
 Frog     1 MDNKGFRRSSLTSFHSSTSDEDMVEINEATLDFTMTDDVPPIDRDMAGGFV---SYNGNGLHGPS 62

Human    73 RIMDFLEEPIPGVGTYDDFNTIDWVREKSRDRDRHREITNKSKESTWALIHSVSDAFSGWLLMLL 137
            ::||||:  :||||||:|||||||||||||||||||||.:|||||||||:.|:|||||||:||||
 Frog    63 KVMDFLD--VPGVGTYEDFNTIDWVREKSRDRDRHREILSKSKESTWALLRSISDAFSGWMLMLL 125

Human   138 IGLLSGSLAGLIDISAHWMTDLKEGICTGGFWFNHEHCCWNSEHVTFEERDKCPEWNSWSQLIIS 202
            |||.:||||||||||:|||||||||||...||||||.|||.|.:||||:|:.||||.|||||::.
 Frog   126 IGLTAGSLAGLIDISSHWMTDLKEGICLPWFWFNHEQCCWQSNNVTFEDRNNCPEWRSWSQLVLG 190

Human   203 TDEGAFAYIVNYFMYVLWALLFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVI 267
            ..||||.||:||||||||||||:.|||.||:.|||||||||||||||||||||||||||||||:|
 Frog   191 RSEGAFPYILNYFMYVLWALLFSLLAVLLVRNFAPYACGSGIPEIKTILSGFIIRGYLGKWTLII 255

Human   268 KTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRREVLSAAAAAGVSVAFGAP 332
            ||:||||||||||||||||||:||||||||||||.|.||||||||||||||||||||||||||||
 Frog   256 KTMTLVLAVSSGLSLGKEGPLIHVACCCGNILCHLFTKYRKNEAKRREVLSAAAAAGVSVAFGAP 320

Human   333 IGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFI 397
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||:|||
 Frog   321 IGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHAPWHLLELIPFI 385

Human   398 LLGIFGGLWGALFIRTNIAWCRKRKTTQLGKYPVIEVLVVTAITAILAFPNEYTRMSTSELISEL 462
            |||||||||||.|||.|||||::||||:||:|||.||||||||||:|||||:|||||:||:||||
 Frog   386 LLGIFGGLWGAFFIRGNIAWCQRRKTTKLGRYPVAEVLVVTAITAVLAFPNDYTRMSSSEMISEL 450

Human   463 FNDCGLLDSSKLCDYENRFNTSKGGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSG 527
            |||||||||||||||.|.:|.:|||.||||.||.|||:|||||:|.||.|.||||||||||:|||
 Frog   451 FNDCGLLDSSKLCDYVNDYNNTKGGNLPDRAAGNGVYTAMWQLSLALIFKAVITIFTFGMKVPSG 515

Human   528 LFIPSMAVGAIAGRLLGVGMEQLAYYHQEWTVFNSWCSQGADCITPGLYAMVGAAACLGGVTRMT 592
            |||||||||||.||||||.||||::||.:|.:|..||:||||||||||||||||||||||.||||
 Frog   516 LFIPSMAVGAIMGRLLGVAMEQLSFYHHDWLIFRGWCNQGADCITPGLYAMVGAAACLGGATRMT 580

Human   593 VSLVVIMFELTGGLEYIVPLMAAAMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAM 657
            |||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||:||||||
 Frog   581 VSLVVIMFELTGGLEYIVPLMAAAMTSKWVADALGRESIYDAHIHLNGYPFLEAKEEFSHKTLAM 645

Human   658 DVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENAR 722
            |||:||||||:|||:|||||||||:|.||:||||||||:|:|||||||||||||||||||:|:||
 Frog   646 DVMRPRRNDPILTVITQDSMTVEDIEAIINETTYSGFPIVISRESQRLVGFVLRRDLIISVESAR 710

Human   723 KKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLV 787
            |||:|:||||.||||||:||.||..||:||||.|:||||||:||.||||||||||||||||||||
 Frog   711 KKQEGIVSTSQIYFTEHTPPQPPTAPPSLKLRAIMDLSPFTITDQTPMEIVVDIFRKLGLRQCLV 775

Human   788 THNGRLLGIITKKDVLKHIAQMANQDPDSILFN 820
            |||||||||||||||||||||||||||||||||
 Frog   776 THNGRLLGIITKKDVLKHIAQMANQDPDSILFN 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLCN5NP_001427685.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 9/17 (53%)
Selectivity filter part_1. /evidence=ECO:0000250 241..245 3/3 (100%)
Selectivity filter part_2. /evidence=ECO:0000250 283..287 3/3 (100%)
Selectivity filter part_3. /evidence=ECO:0000250 527..531 3/3 (100%)
clcn5NP_001039210.1 ClC_3_like 127..632 CDD:239656 431/504 (86%)
CBS_pair_voltage-gated_CLC_euk_bac 643..793 CDD:341367 127/149 (85%)
CBS repeat 649..744 CDD:341367 76/94 (81%)
CBS repeat 750..792 CDD:341367 39/41 (95%)

Return to query results.
Submit another query.