DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLCN5 and ClC-b

DIOPT Version :10

Sequence 1:NP_001427685.1 Gene:CLCN5 / 1184 HGNCID:2023 Length:820 Species:Homo sapiens
Sequence 2:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster


Alignment Length:848 Identity:242/848 - (28%)
Similarity:382/848 - (45%) Gaps:198/848 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    44 DDVPPLDREVGGIIIEDKSYNGGGIGSSNRIMDFLEEPI------PGVGTYDDFNTIDW-VREKS 101
            :.|||           |...||.. ||.||.:: ..|||      ....:..::.::|: |.|.:
  Fly    74 NSVPP-----------DIPINGSA-GSPNRNIN-SSEPIFHLRSRTAAASTPNYESLDYEVCENT 125

Human   102 RDRDRHRE-ITNKSKESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKEGICT 165
            ..:|..|: :|.:         .|:......|::.:.||:::..:|..|||....::..|     
  Fly   126 LFQDEQRKRLTER---------FSLRKDIIRWIIFIQIGIITALIACTIDIIIEELSIRK----- 176

Human   166 GGFWFNHEHCCWNSEHVTFEERDKCPEWNSWSQLIISTDEGAFAYIVNYFMYVLWALLFAFLAVS 230
                            .||       .:||..:.:..:|......::.|..::|::::......:
  Fly   177 ----------------YTF-------LYNSVKENVPLSDASDRDLLIPYLYWLLFSIVPVAFGAA 218

Human   231 LVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCC 295
            :|....|...|||||::|:.|:|..|...:...||.:|.|.::.:|..||:.|||||::|    .
  Fly   219 MVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIH----A 279

Human   296 GNILC---------------HCFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEVSY 345
            |.::.               ..|..:|.:..||..|| ...|||||.||||||||:||||||.:.
  Fly   280 GAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVL-GGGAAGVSAAFGAPIGGMLFSLEEAAS 343

Human   346 YFPLKTLWRSFFAALVAAFTL-------RSINPFGNSRLVLFYV-EFHTP--WHLFELVPFILLG 400
            ::....:||:..|::::.|||       ..:|.|  :...||.: :|.||  :..|||..|::||
  Fly   344 FWNQNLIWRTLVASIISVFTLNIVLSAYHGLNDF--TFTGLFNLGKFDTPLKFDYFELPIFMILG 406

Human   401 IFGGLWGALF--IRTNIAWCRKRKTT-QLGKYPVIEVLVVTAITAILAFPNEYTRMSTSELISEL 462
            :.|||.||.:  :.|.|...|||... ::||  |:|.:||..:...||.           |:...
  Fly   407 VTGGLLGAAWNSLNTKINKFRKRFIPWKIGK--VLEAVVVAMMGVTLAC-----------LMIYF 458

Human   463 FNDCGLLDSSK-------LCDYENRFNTSKGGELPDRPAGVGVYSAMW----------------- 503
            .|||..|.:..       .|: :|.:|               ..:|:|                 
  Fly   459 INDCRPLGNDPTNNPVQLFCE-DNEYN---------------AVAALWFQTPEATVRSLFHDPPG 507

Human   504 -----QLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHQEWTVFNSW 563
                 .|||..::..|::..|||:.:..|:|||:..|||..||||.:    |.||     ||.. 
  Fly   508 SHKILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAM----LTYY-----VFPQ- 562

Human   564 CSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTG-GLEYIVPLMAAAMTSKWVADALG 627
                |:.:.||.||::||||.||||.|||:||.||:.|.|| ...:..||:.|.:::|||.|.. 
  Fly   563 ----AEFLHPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALISAKWVGDYF- 622

Human   628 REGIYDAHIRLNGYPFLEAKEEFAHKTL-AMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTY 691
            .|||||..|::|..|.|..:....:|.| |.:::    :.|::.:..:||...  :..::.:..:
  Fly   623 NEGIYDTQIQVNHVPMLTWEPLPQYKGLKAREIL----SKPVICIKIRDSANY--IYEMLKKCDH 681

Human   692 SGFPVVVS-----RESQRLVGFVLRRDLII------SIENARKKQDGVVSTSIIYFTEHSPPLPP 745
            :|||||..     |...|:.|.:||..||:      .:||   |:..:..|||..|.:..|..|.
  Fly   682 NGFPVVDDVCGDRRSEGRVCGIILRSQLIVILLKSLYVEN---KRFWLPETSIQTFRDLYPRFPS 743

Human   746 YTPP---------TLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLV-THNGRLLGIITKK 800
            ....         |:.|...::.||..|.....:..:..|||.||||..|| .|..|:.||||::
  Fly   744 IKSVRKLDEKINYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRR 808

Human   801 DVL 803
            |.:
  Fly   809 DFI 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLCN5NP_001427685.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Selectivity filter part_1. /evidence=ECO:0000250 241..245 3/3 (100%)
Selectivity filter part_2. /evidence=ECO:0000250 283..287 3/3 (100%)
Selectivity filter part_3. /evidence=ECO:0000250 527..531 2/3 (67%)
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 180/611 (29%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 46/169 (27%)
CBS repeat 657..763 CDD:341367 26/110 (24%)
CBS repeat 769..812 CDD:341367 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.

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