DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLCN5 and Clcn5

DIOPT Version :10

Sequence 1:NP_001427685.1 Gene:CLCN5 / 1184 HGNCID:2023 Length:820 Species:Homo sapiens
Sequence 2:XP_011245744.1 Gene:Clcn5 / 12728 MGIID:99486 Length:851 Species:Mus musculus


Alignment Length:855 Identity:794/855 - (92%)
Similarity:808/855 - (94%) Gaps:39/855 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAMWQ-----------------------------------GAMDNRGFQQGSFSSFQNSSSDEDL 30
            |||||                                   ||||||||.||||||||:|||||||
Mouse     1 MAMWQGMNSGRQAWPLDHLPTDSSRQLPGSSEWNPGPYMLGAMDNRGFHQGSFSSFQSSSSDEDL 65

Human    31 MDIPATAMDFSMRDDVPPLDREVGGIIIEDKSYNGGGIGSSNRIMDFLEEPIPGVGTYDDFNTID 95
            ||||.|||||||||||||||||:.|    :|||||||||||||:|||||||||||||||||||||
Mouse    66 MDIPGTAMDFSMRDDVPPLDREIEG----NKSYNGGGIGSSNRVMDFLEEPIPGVGTYDDFNTID 126

Human    96 WVREKSRDRDRHREITNKSKESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLK 160
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   127 WVREKSRDRDRHREITNKSKESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLK 191

Human   161 EGICTGGFWFNHEHCCWNSEHVTFEERDKCPEWNSWSQLIISTDEGAFAYIVNYFMYVLWALLFA 225
            |||||||||||||||||||||||||.||||||||||:||||:||:||||||||||||||||||||
Mouse   192 EGICTGGFWFNHEHCCWNSEHVTFEHRDKCPEWNSWAQLIINTDQGAFAYIVNYFMYVLWALLFA 256

Human   226 FLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVH 290
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   257 FLAVSLVKAFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVH 321

Human   291 VACCCGNILCHCFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRS 355
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   322 VACCCGNILCHCFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRS 386

Human   356 FFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 420
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
Mouse   387 FFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFIVLGIFGGLWGALFIRTNIAWCRK 451

Human   421 RKTTQLGKYPVIEVLVVTAITAILAFPNEYTRMSTSELISELFNDCGLLDSSKLCDYENRFNTSK 485
            |||||||||||:|||:|||||||||||||||||||||||||||||||||||||||||||.|||||
Mouse   452 RKTTQLGKYPVVEVLIVTAITAILAFPNEYTRMSTSELISELFNDCGLLDSSKLCDYENHFNTSK 516

Human   486 GGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQL 550
            ||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   517 GGELPDRPAGVGIYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQL 581

Human   551 AYYHQEWTVFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLMAA 615
            ||||.:|.:||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   582 AYYHHDWGIFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLMAA 646

Human   616 AMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVE 680
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   647 AMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVE 711

Human   681 DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPP 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||
Mouse   712 DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPMPP 776

Human   746 YTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMA 810
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   777 YTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMA 841

Human   811 NQDPDSILFN 820
            ||||||||||
Mouse   842 NQDPDSILFN 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLCN5NP_001427685.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 22/59 (37%)
Selectivity filter part_1. /evidence=ECO:0000250 241..245 3/3 (100%)
Selectivity filter part_2. /evidence=ECO:0000250 283..287 3/3 (100%)
Selectivity filter part_3. /evidence=ECO:0000250 527..531 3/3 (100%)
Clcn5XP_011245744.1 ClC_3_like 177..675 CDD:239656 483/497 (97%)
CBS_pair_voltage-gated_CLC_euk_bac 686..836 CDD:341367 148/149 (99%)
CBS repeat 692..787 CDD:341367 93/94 (99%)
CBS repeat 793..835 CDD:341367 41/41 (100%)

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