DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ap3s2 and AP-1sigma

DIOPT Version :10

Sequence 1:NP_033812.3 Gene:Ap3s2 / 11778 MGIID:1337060 Length:193 Species:Mus musculus
Sequence 2:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster


Alignment Length:151 Identity:55/151 - (36%)
Similarity:100/151 - (66%) Gaps:6/151 - (3%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIY 65
            |:..:|:|:..||.||.::|..:|::::::|.||....:|.|...:|:|||      ..|.|::|
  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLE------WKDCKIVY 59

Mouse    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVL 130
            :.||:|||...::.:::||..|::|..:||.|||.|.:|||||:||:.:|.::||.|:::||.:.
  Fly    60 KRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124

Mouse   131 ETNMNEIVAQIEAQNRLEKSE 151
            ||:...::..|.:|:.|::.|
  Fly   125 ETSKKNVLKAIASQDLLQEDE 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ap3s2NP_033812.3 AP3_sigma 1..146 CDD:341438 53/144 (37%)
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 53/146 (36%)

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