Sequence 1: | XP_006517586.1 | Gene: | Ap3b1 / 11774 | MGIID: | 1333879 | Length: | 1118 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
Alignment Length: | 1201 | Identity: | 586/1201 - (48%) |
---|---|---|---|
Similarity: | 772/1201 - (64%) | Gaps: | 139/1201 - (11%) |
- Green bases have known domain annotations that are detailed below.
Mouse 2 SSNSFA---YNEQSGGGEAAELGQEATSTISPSGAFGLFSSDWKKNEDLKQMLESNKDSAKLDAM 63
Mouse 64 KRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPN 128
Mouse 129 QLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEMLIEVIE 193
Mouse 194 KLLKDKSTLVAGSVVMAFEEVCPDRIDLIHRNYRKLCNLLVDVEEWGQVVIIHMLTRYARTQFVS 258
Mouse 259 PWREDGGLEDN-------EKNFYESE----------EEEEEKEKSSR-----------------K 289
Mouse 290 KSYAMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSEAGVISKSLVRLLRSNREVQYIV 354
Mouse 355 LQNIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVRSQDK 419
Mouse 420 QFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIRHM 484
Mouse 485 AKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLAAKLYLTNS 549
Mouse 550 KQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVP-NEKSGALSKYAKKIFLAPKPAPLLESPFK 613
Mouse 614 DRDRFQLGTLSHTLNIKASGYLELSNWPEVAPDPSVRNVEVIESAK---EWTPLGKTK------- 668
Mouse 669 -KEKPM---KKFYSESEEEEDEDEDEDEEEEEKEDEDENPSDSSSDSESGSGSESGDTGTEDSSE 729
Mouse 730 DSSSGQDSETGSQAEAERQKVAKRNSKTKRKSDSENRE------------KKNENSKASE--SSS 780
Mouse 781 EESSSMEDSSSESESESGSDSE-----------PAPRNVAPAKERKPQQERHPPSKDVFLLDLDD 834
Mouse 835 FNPVSTPVALP------TPALSPSLIADLEGLNLSTSSSVINVSTPVFVPTKTHELLHRMHGKGL 893
Mouse 894 AAHYCFPRQPCIFSDKMVSVQITLTNTSDRKIENIHIGGKGLPVGMQMHAFHPIDSLEPKGSVTV 958
Mouse 959 SVGIDFCDSTQTASFQLCTKDDCFNVTLQPPVGELLSPVAMSEKDFKKEQACLCFTSVCSANQGT 1023
Mouse 1024 LTGMNETSATLIAAPQNFTPSMIL-QKV---VNVANLGAVPSSQDNVHRFAARTVHSGSLMLVTV 1084
Mouse 1085 ELKEGSTAQLIINTEKTVIGSVLLRELKPVL 1115 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ap3b1 | XP_006517586.1 | Adaptin_N | 46..582 | CDD:366724 | 379/569 (67%) |
HEAT repeat | 116..144 | CDD:293787 | 27/27 (100%) | ||
HEAT repeat | 150..180 | CDD:293787 | 21/29 (72%) | ||
HEAT repeat | 188..213 | CDD:293787 | 17/24 (71%) | ||
SEEEED | <734..812 | CDD:373302 | 26/102 (25%) | ||
AP3B1_C | 824..969 | CDD:373301 | 49/150 (33%) | ||
rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 384/580 (66%) |
HEAT repeat | 48..73 | CDD:293787 | 19/24 (79%) | ||
HEAT repeat | 117..144 | CDD:293787 | 26/26 (100%) | ||
Cnd1 | 129..>252 | CDD:289487 | 92/122 (75%) | ||
HEAT repeat | 147..179 | CDD:293787 | 22/31 (71%) | ||
HEAT repeat | 188..214 | CDD:293787 | 17/25 (68%) | ||
AP3B1_C | 881..1019 | CDD:291462 | 42/139 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167833471 | |
Domainoid | 1 | 1.000 | 757 | 1.000 | Domainoid score | I87 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H68125 | |
Inparanoid | 1 | 1.050 | 1003 | 1.000 | Inparanoid score | I293 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54550 | |
OrthoDB | 1 | 1.010 | - | - | D147356at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002006 | |
OrthoInspector | 1 | 1.000 | - | - | otm43466 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101595 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2031 |
SonicParanoid | 1 | 1.000 | - | - | X1748 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.940 |