DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP3S1 and AP-1sigma

DIOPT Version :9

Sequence 1:XP_016864514.1 Gene:AP3S1 / 1176 HGNCID:2013 Length:238 Species:Homo sapiens
Sequence 2:NP_001247273.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster


Alignment Length:151 Identity:41/151 - (27%)
Similarity:77/151 - (50%) Gaps:30/151 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   101 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIY 165
            |:..:|:|:..||.||.|:|..|.:..:::|.||....:..|...:|:|||      ..|.|::|
  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLE------WKDCKIVY 59

Human   166 RHYATLYFVFCVDSSESELGILDLI------------------------QVHNILAEMVMGGMVL 206
            :.||:|||...::.:::||..|::|                        :.:.||.|:::||.:.
  Fly    60 KRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124

Human   207 ETNMNEIVTQIDAQNKLEKSE 227
            ||:...::..|.:|:.|::.|
  Fly   125 ETSKKNVLKAIASQDLLQEDE 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP3S1XP_016864514.1 None
AP-1sigmaNP_001247273.1 AP1_sigma 4..145 CDD:341435 39/146 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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