Sequence 1: | NP_476704.1 | Gene: | RacGAP84C / 117503 | FlyBaseID: | FBgn0045843 | Length: | 384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001240737.1 | Gene: | Racgap1 / 26934 | MGIID: | 1349423 | Length: | 628 | Species: | Mus musculus |
Alignment Length: | 294 | Identity: | 114/294 - (38%) |
---|---|---|---|
Similarity: | 162/294 - (55%) | Gaps: | 25/294 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 LQDRVDMNPSGCDGLSTDGLDFCSQSHSGLLREHNFKIKSYYYNVGNCVHCRKRIRFAMASLRCR 118
Fly 119 ACPLRCHIGCCRQLTVNCIPQPQIGTK----RGCLSDYAPRVAPMVPALIVHCVTEIEARGLQQE 179
Fly 180 GLYRVSSTREKCKRLRRKLLRGKSTPHLGN-KDTHTLCCCVKDFLRQLVHPLIPIYHRRDFEEAT 243
Fly 244 RHEDRLAVEMAVYLAVLELHQAHRDTLAYLMLHWQKIAESPAVRMTVNNLAVIFAPTLFGDLDLT 308
Fly 309 LENVVTWQ---RVLKV---LLLMPAGFWSQFLEV 336 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RacGAP84C | NP_476704.1 | C1_1 | 87..139 | CDD:278556 | 20/51 (39%) |
RhoGAP_MgcRacGAP | 142..330 | CDD:239847 | 80/198 (40%) | ||
Racgap1 | NP_001240737.1 | Tropomyosin | 43..>108 | CDD:395200 | |
Interaction with SLC26A8. /evidence=ECO:0000250 | 107..286 | 7/30 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 179..201 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 242..284 | 6/28 (21%) | |||
C1_MgcRacGAP | 286..339 | CDD:410371 | 22/54 (41%) | ||
RhoGAP_MgcRacGAP | 347..540 | CDD:239847 | 78/192 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 143 | 1.000 | Domainoid score | I4632 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3564 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0.928771 | Normalized mean entropy | S4674 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004815 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4412 |
SonicParanoid | 1 | 1.000 | - | - | X3396 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.750 |