DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr10a and Gr28a

DIOPT Version :9

Sequence 1:NP_727523.1 Gene:Gr10a / 117501 FlyBaseID:FBgn0045502 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster


Alignment Length:401 Identity:79/401 - (19%)
Similarity:143/401 - (35%) Gaps:117/401 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GYFCYHFRT-LTDTLDRRLQLLFYVSFTNTAIKYATV----IVTYVANTVHFEAINQRCTMQRTH 126
            |||   |:| :|...|..|:|...::. :|...:|..    :|:.:.|.:..:.|..|..|    
  Fly    76 GYF---FQTNITRFSDGTLRLTGILAM-STIFGFAMFKRQRLVSIIQNNIVVDEIFVRLGM---- 132

  Fly   127 LEFEFKNAPQEPKRPFEFFMYFKFCLINL-MMMIQVCGIFAQYGEVGKGSVSQVRVHFAIYAFVL 190
                        |..:...:...| ||:| |::..|..:...|..:...::|...|.|..:|...
  Fly   133 ------------KLDYRRILLSSF-LISLGMLLFNVIYLCVSYSLLVSATISPSFVTFTTFALPH 184

  Fly   191 WNYTENMADYCYFINGSVLKYY-------RQFNLQLGSLRDEMDG---------LRPGGMLLHHC 239
            .|           |:..|.|:.       .:|::....|:|.:|.         |.|...:::| 
  Fly   185 IN-----------ISLMVFKFLCTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSVVNH- 237

  Fly   240 CELSDRLEELRRRCREIHDLQRESFRMHQF-QLIGLMLSTLINNLTNFYTLFHMLAKQSLEEVSY 303
                      ||....:.:|.....:.:.. .:|.|.....|..::|.:.|...:.:...|..:|
  Fly   238 ----------RRYSHRLRNLISTPMKRYSVTSVIRLNPEYAIKQVSNIHNLLCDICQTIEEYFTY 292

  Fly   304 PVVVGSVYATGF----YIDTYIVALINEHIKLEL------------------------------- 333
            |::  .:.|..|    :.|.||:..|....:|::                               
  Fly   293 PLL--GIIAISFLFILFDDFYILEAILNPKRLDVFEADEFFAFFLMQLIWYIVIIVLIVEGSSRT 355

  Fly   334 -------EAVALTMRRFAEPREMDERLTREIEHLSLELLNYQPPML--CGLLHLDRRLVYLIAVT 389
                   .|:...:....:..|:.:||.|    |||: |:::..:.  .||..|||.|::.|...
  Fly   356 ILHSSYTAAIVHKILNITDDPELRDRLFR----LSLQ-LSHRKVLFTAAGLFRLDRTLIFTITGA 415

  Fly   390 AFSYFITLVQF 400
            |..|.|.|:||
  Fly   416 ATCYLIILIQF 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr10aNP_727523.1 7tm_7 20..402 CDD:285581 79/401 (20%)
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 79/401 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.