DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22a and Gr93d

DIOPT Version :9

Sequence 1:NP_722733.1 Gene:Gr22a / 117500 FlyBaseID:FBgn0045501 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_732666.1 Gene:Gr93d / 117470 FlyBaseID:FBgn0045468 Length:381 Species:Drosophila melanogaster


Alignment Length:435 Identity:84/435 - (19%)
Similarity:162/435 - (37%) Gaps:135/435 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IRATLYGSWVLGLFPF--------TFDSRKRR----------LNRSKWLLAYGLVLNLTLLVLSM 65
            ::||.|...:|....|        .|..||::          .|||:|..     :::||.::.:
  Fly     1 MKATKYSVGILRFMSFYARFLSLVCFRLRKQKDNNVWLEEIWSNRSRWKW-----ISVTLRIVPL 60

  Fly    66 LPSTDDHNSVKVEVFQRNPLVKQVEELVEVISLITTL-----VTHLRTFSRSSELVEILNELL-- 123
            .    .:.....|......|:  .|:.:...||:.::     :.||: .....|:.:::|:.|  
  Fly    61 C----IYAFTYAEWISNRMLI--TEKFLHSCSLVVSIPCYLSIIHLK-ICHGPEVTKLVNQYLHI 118

  Fly   124 ----VLDKNHFSK---------LMLSECHTFNRYVIEKGLVIILEIGSSL-----VLYFGIPNSK 170
                .||....|:         |:||.|...:.|      |.||.|.|.|     ::::      
  Fly   119 FRLGTLDIRRRSQFGGGRELFLLILSVCCQIHEY------VFILVIASRLCGFQHIIWW------ 171

  Fly   171 IVVYEAVCIYIVQLEVLMVVMHFHLAVIYIYRYLWIINGQLLD--------MASRLRRGDSVDPD 227
             |.|..|.|....:.....:.|..|.|:|         .:|.|        ..:.||:...:   
  Fly   172 -VSYTYVFIICNSIMCFGFIWHLSLGVLY---------AELNDNLRFESGFQTAFLRKQQRI--- 223

  Fly   228 RIQLLLWLYSRLLDLNHRLTAIYDI-QVTLFMATLFSVNIIVGHVLVICWINITRFSLLVIFLLF 291
            |:|..:.|:.   :::..:|::.|| .|.||::.|                 :|...:||::  :
  Fly   224 RVQKSMALFK---EISSVVTSLQDIFNVHLFLSAL-----------------LTLLQVLVVW--Y 266

  Fly   292 PQALIINFWD--LWQGIAFCDLAESTGKKTSMILKLFNDMENMDQETERRVTEFTL--------- 345
            ...:.:.|.|  :| ..:..:|.:     |.:.:....:..|..::|..|..:..|         
  Fly   267 KMIIDLGFSDFRIW-SFSLKNLIQ-----TLLPVLAIQEAANQFKQTRERALDIFLVGKSKHWMK 325

  Fly   346 ----FCSHRRL---KVCHLGLLDINYEMGFRMIITNILYVVFLVQ 383
                |.:|..|   :|..|||.:::.|:...::.....|:||:.|
  Fly   326 SVEIFVTHLNLSEFRVNLLGLFNVSNELFLIIVSAMFCYLVFVTQ 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22aNP_722733.1 7tm_7 19..388 CDD:285581 84/435 (19%)
Gr93dNP_732666.1 7tm_7 11..375 CDD:285581 81/425 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.