DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22c and Gr43a

DIOPT Version :9

Sequence 1:NP_722732.2 Gene:Gr22c / 117499 FlyBaseID:FBgn0265138 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:481 Identity:87/481 - (18%)
Similarity:164/481 - (34%) Gaps:160/481 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YSSWFLGVFPYRFDSRN--GQLKRSRFLLF--YG----LILNFFLLLKMVCSGGQKLGIPEAF-- 76
            |.|..|.:.||. ..||  |:::..|..||  |.    :::.|.....::.....::.:..:|  
  Fly    12 YISKVLALAPYA-TVRNSKGRVEIGRSWLFTVYSATLTVVMVFLTYRGLLFDANSEIPVRASFRM 75

  Fly    77 --ARNSVLENTHYTTGMLAVFSCVVIHFLNFWGSTRVQDLANELLVLEYQQFASLNETKCPKFNS 139
              |.:.|:.....:..::|:.|.|.....:...:..:.|..|::            :.....:|:
  Fly    76 KSATSKVVTALDVSVVVMAIVSGVYCGLFSLNDTLELNDRLNKI------------DNTLNAYNN 128

  Fly   140 FVIQKW--LSVIGLLLSYLSIAYGLPGNNFSVEMVLINSLVQFSFNCNI--------MHYYIGVL 194
            |...:|  |.:..:.|..:||..||.          :.:.::.:.:.||        :|:||...
  Fly   129 FRRDRWRALGMAAVSLLAISILVGLD----------VGTWMRIAQDMNIAQSDTELNVHWYIPFY 183

  Fly   195 LIYRYLWLIN--------------GQLLEMVTN-------------------------------- 213
            .:|..|..:.              |:|..|:::                                
  Fly   184 SLYFILTGLQVNIANTAYGLGRRFGRLNRMLSSSFLAENNATSAIKPQKVSTVKNVSVNRPAMPS 248

  Fly   214 -------------LKLDCSVDSSRIRKYLSLYRRLLEL-------KGYMVATY-EYHMTLVLTTG 257
                         |..:.:.|.:..|. |.|...||:|       ||.::.:. :.|.:|.....
  Fly   249 ALHASLTKLNGETLPSEAAGDKAAARS-LILNVELLKLGYFPAKNKGLLLKSLADSHESLGKCVH 312

  Fly   258 LASNFLAIYSWIVLDISMNINFI-----------------YLLIFPLFLLVNVWNLWLSIAASDL 305
            |.||...|....:| :|..::.:                 ||.:..|::..:...|.:.:....|
  Fly   313 LLSNSFGIAVLFIL-VSCLLHLVATAYFLFLELLSKRDNGYLWVQMLWICFHFLRLLMVVEPCHL 376

  Fly   306 AENAGKSTQTVLKLFADLEVKDIELERSVNEFALLCGHCQF---------NFHVCGLFTINYKMG 361
            |....:.|..::          .|:||.|:|..|.....:|         :|..|||..:|    
  Fly   377 AARESRKTIQIV----------CEIERKVHEPILAEAVKKFWQQLLVVDADFSACGLCRVN---- 427

  Fly   362 FQMIITSF-----LYLIYMIQFDFMN 382
             :.|:|||     .||:.:|||...|
  Fly   428 -RTILTSFASAIATYLVILIQFQRTN 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22cNP_722732.2 7tm_7 17..382 CDD:285581 86/479 (18%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 85/476 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.