DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22c and egl-47

DIOPT Version :10

Sequence 1:NP_722732.2 Gene:Gr22c / 117499 FlyBaseID:FBgn0265138 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:337 Identity:68/337 - (20%)
Similarity:126/337 - (37%) Gaps:119/337 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GVFPYRFDSRNGQLKRSRFLLFYGLILNFF--LLLKMVCSGGQKLGIPEAFARNSVLENTHYTTG 90
            ||.|        .|:..:|:.|:.|::.||  |:||:|    :.:|..|.|..:.:.:.:.....
 Worm   228 GVSP--------PLRIYKFVFFFTLLIIFFSALILKVV----EFVGTGEIFGEHILTDCSFILVP 280

  Fly    91 MLAVFSCVVI---HFLN----FWGSTRVQDLANE------LLVLEYQQF---ASLNETKCPKFNS 139
            :|::::.:.:   |..|    |:..|.::.:..|      .|...|:||   .::.|.....||.
 Worm   281 VLSLWNIIPLLYYHLYNILVRFYCRTLIKSMNREHKKRHFSLKFYYEQFTRITNVQEAVGDVFNP 345

  Fly   140 FVI--QKW-LSVIGLLLSYLSIAYGLPGNNFSVEMVLINSLVQFSFNCNIMHYYIGVLLIYRYLW 201
            .::  ..| |.|:.|.|.:||       ...|..:|.|..                         
 Worm   346 LLLFSLAWSLLVLCLTLYFLS-------EPTSTLLVPITP------------------------- 378

  Fly   202 LINGQLLEMVTNLKLDCSVDSSRIRKYLSLYRRLLELK----GYMVATYEYHMTLVLTTGLASN- 261
                   |.|||.|         ||:.|::   .:.:|    .|.|.....|:.::.:||:.:| 
 Worm   379 -------EQVTNPK---------IREKLNI---TVHVKICWAAYQVVMAILHIIIICSTGMMTNE 424

  Fly   262 ----FLAIYSWIVLDISMNIN------FIYLL------------IFPL-----FLLVNV---WNL 296
                .:.....||.|.:.:::      |::.:            .|||     |.|::|   ::|
 Worm   425 TTRQIVNAVLRIVPDANADLDRFQISCFVHKMTTQFMWGMTVWRAFPLERTTFFTLISVIVTYSL 489

  Fly   297 WLSIAASDLAEN 308
            .|.....|:.:|
 Worm   490 LLFRFKDDMVQN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22cNP_722732.2 7tm_7 17..382 CDD:462463 68/337 (20%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:473258 66/329 (20%)

Return to query results.
Submit another query.