DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22c and Gr93c

DIOPT Version :9

Sequence 1:NP_722732.2 Gene:Gr22c / 117499 FlyBaseID:FBgn0265138 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_732665.1 Gene:Gr93c / 117471 FlyBaseID:FBgn0045469 Length:397 Species:Drosophila melanogaster


Alignment Length:429 Identity:73/429 - (17%)
Similarity:140/429 - (32%) Gaps:156/429 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 WIILKATLYSSWFLGVF--PYRFDSRNGQLKRSR-FLLFYGLILNFFLLLKMVCSGGQKLGIPEA 75
            |..|...|.|...:..|  ||..|..:...:..: |.|...||....:::..||           
  Fly    54 WFCLSCRLISVTAVCCFCAPYVADIEDPYERLLQCFRLSASLICGICIIVVQVC----------- 107

  Fly    76 FARNSVLENTHYTTGMLAVFSCVVIHFLNFWGSTRVQDLANELLVLEYQQFASLNETKCPKFNSF 140
                       |...:|.    ::|.||..:  .||:.|::    |:...|....|.      ..
  Fly   108 -----------YEKELLR----MIISFLRLF--RRVRRLSS----LKRIGFGGKREF------FL 145

  Fly   141 VIQKWLSVIGLLLSYLSIAYGLPGNNFSVEMVLINSLVQFSFNCN---------IMHY-YIGVLL 195
            ::.|::.::..|.|.:...:.||           :||..|:..|.         |:|. ::|.|.
  Fly   146 LLFKFICLVYELYSEICQLWHLP-----------DSLSLFATLCEIFLEIGSLMIIHIGFVGYLS 199

  Fly   196 IYRYLWLING----QLLEMVTNL---------KLDCSVDSSRIRKYLSLY----------RRLLE 237
            :......:|.    :|...:.:|         :....:...|:.:.:|:|          .||||
  Fly   200 VAALYSEVNSFARIELRRQLRSLERPVGGPVGRKQLRIVEYRVDECISVYDEIERVGRTFHRLLE 264

  Fly   238 LKGYMVATYEYHMTLVLTTGLASNFLAIYSWIVLDISMNINFIYLLIFPLFLL--VNVWNLWLSI 300
            |.           .|::..|      .|::..:|...       ::|.|....  :.:|.|    
  Fly   265 LP-----------VLIILLG------KIFATTILSYE-------VIIRPELYARKIGMWGL---- 301

  Fly   301 AASDLAENAGKSTQTVLKLFADLEVKDIELERSVNEFALL--------------CGHCQ------ 345
                           |:|.|||:.:..:.:..:|:...::              ..|.:      
  Fly   302 ---------------VVKSFADVILLTLAVHEAVSSSRMMRRLSLENFPITDHKAWHMKWEMFLS 351

  Fly   346 ----FNFHV--CGLFTINYKMGFQMIITSFLYLIYMIQF 378
                |.|.|  .|||.::.::....:.:...|..|::|:
  Fly   352 RLNFFEFRVRPLGLFEVSNEVILLFLSSMITYFTYVVQY 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22cNP_722732.2 7tm_7 17..382 CDD:285581 72/426 (17%)
Gr93cNP_732665.1 7tm_7 18..393 CDD:285581 73/429 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.