DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22e and Gr59d

DIOPT Version :9

Sequence 1:NP_722731.1 Gene:Gr22e / 117498 FlyBaseID:FBgn0045497 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_611758.2 Gene:Gr59d / 117343 FlyBaseID:FBgn0041236 Length:390 Species:Drosophila melanogaster


Alignment Length:407 Identity:91/407 - (22%)
Similarity:167/407 - (41%) Gaps:73/407 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YGSWILGVFPFAYDSWTRTLRRSKWLIAYGFVLNAA------FILLVVTNDTESETPLRMEVFHR 81
            ||. :.||..|..|     |:..:.|:..|..|.:.      |.||:...       :|..|.  
  Fly    15 YGR-LTGVINFKID-----LKTGQALVTRGATLISVSTHLLIFALLLYQT-------MRKSVV-- 64

  Fly    82 NALAEQINGIHD-----IQSLSMVSIML-LRSFWKSGDIERTLNEL-EDLQHRYFRNYS-LEECI 138
            |.:.:..|.:|:     |....:|.:.| |.|.|..   .||...| ...:..|.||.. ::.| 
  Fly    65 NVMWKYANSLHEYVFLVIAGFRVVCVFLELVSRWSQ---RRTFVRLFNSFRRLYQRNPDIIQYC- 125

  Fly   139 SFDRFVLYKGFSVVLELVSMLVLELGMSPNYSAQFFIGLGSLCLMLLAVLLGASHFHLAVVFVY- 202
              .|.::.|.|.|.:.....:::.|.|..|..:.      :|.|.:.|||...:..::.:...| 
  Fly   126 --RRSIVSKFFCVTMTETLHIIVTLAMMRNRLSI------ALALRIWAVLSLTAIINVIITQYYV 182

  Fly   203 -------RYVWIVNRELLKLVNKMAI------GETVE-----SERMDLLLYLYHRLLDLGQRLAS 249
                   ||. ::|::|..:|.:...      |..|.     ::|::.:......|.:|.:.|::
  Fly   183 ATACVRGRYA-LLNKDLQAIVTESQSLVPNGGGVFVTKCCYLADRLERIAKSQSDLQELVENLST 246

  Fly   250 IYDYQMVMVMVSFLIANVLGIYFFIIYSISLNKSLDFKILVFVQA-----LVINMLDFWLNV-EI 308
            .|:.::|.:::::.: |:||. .::::|||...:....:||.:..     .|..::|.|:|. .:
  Fly   247 AYEGEVVCLVITYYL-NMLGT-SYLLFSISKYGNFGNNLLVIITLCGIVYFVFYVVDCWINAFNV 309

  Fly   309 CELAERTGRQTSTILK--LFNDIENIDEKLERSITDFALFCSHRRLRFHHCGLFYVNYEMGFRMA 371
            ..|.:...:....:.|  ||.  ..:|.:||....:|||......|:.|..|||.......|.:.
  Fly   310 FYLLDAHDKMVKLLNKRTLFQ--PGLDHRLEMVFENFALNLVRNPLKLHMYGLFEFGRGTSFAVF 372

  Fly   372 ITSFLYLLFLIQFDYWN 388
            .:...:.|.|||:|..|
  Fly   373 NSLLTHSLLLIQYDVQN 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22eNP_722731.1 7tm_7 18..388 CDD:285581 90/405 (22%)
Gr59dNP_611758.2 7tm_7 9..389 CDD:285581 90/405 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.