DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr98a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_651564.1 Gene:Gr98a / 43305 FlyBaseID:FBgn0039520 Length:391 Species:Drosophila melanogaster


Alignment Length:423 Identity:83/423 - (19%)
Similarity:161/423 - (38%) Gaps:91/423 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IHGLTSFYISCDTKTGKKAIKKTIFG---YINGIMHIAMFV-----------FAYSLTIYNNCES 104
            :|..:..|:    :...|.:....||   :..|..::.:||           |.|... |:    
  Fly     8 LHAASLLYM----RRLMKCLGMLPFGQNLFSKGFCYVLLFVSLGFSSYWRFSFDYEFD-YD---- 63

  Fly   105 VASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPN--HRLERCLQKFHTMDVQLQTVGVKIMY 167
                |...|.:...||...|:..:|..:|.|.....|  ..::|.||..|: .::|| :|.....
  Fly    64 ----FLNDRFSSTIDLSNFVALVLGHAIIVLELLWGNCSKDVDRQLQAIHS-QIKLQ-LGTSNST 122

  Fly   168 SKVLRFS---YMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFSCFT 229
            .:|.|:.   |..||..:|:.::.|      :||:. |.|:...::.|       :.:|.||.||
  Fly   123 DRVRRYCNWIYGSLIIRWLIFIVVT------IYSNR-ALTINATYSEL-------VFLARFSEFT 173

  Fly   230 -------YLVEMRLVMVNKVLKNL----AHQWDTRSLKAVNQKQRSLQCLDSFSMYTIVTKDPAE 283
                   ::.:..:|..:.||..|    ...|..|.|..  ||...||.                
  Fly   174 LYCAVILFIYQELIVGGSNVLDELYRTRYEMWSIRRLSL--QKLAKLQA---------------- 220

  Fly   284 IIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFV 348
                   ||:.:.:|......||...|:|::...|:......|::..:.:    ..::.....:|
  Fly   221 -------IHNSLWQAIRCLECYFQLSLITLLMKFFIDTSALPYWLYLSRV----EHTRVAVQHYV 274

  Fly   349 TFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINF 413
            ....|..:|.::....:   ..|......|...:.:::....:|:::...|:..::||...|..|
  Fly   275 ATVECIKLLEIVVPCYL---CTRCDAMQRKFLSMFYTVTTDRRSSQLNAALRSLNLQLSQEKYKF 336

  Fly   414 TAAGLFNIDRTLYFTISGALTTYLIILLQFTSN 446
            :|.|:.:|:..:.......:.:|::|.:||:.|
  Fly   337 SAGGMVDINTEMLGKFFFGMISYIVICIQFSIN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 80/418 (19%)
Gr98aNP_651564.1 7tm_7 13..370 CDD:285581 82/418 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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