DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr66a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_523971.3 Gene:Gr66a / 38935 FlyBaseID:FBgn0035870 Length:527 Species:Drosophila melanogaster


Alignment Length:545 Identity:105/545 - (19%)
Similarity:206/545 - (37%) Gaps:159/545 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QPLRRRFRRFVTAKQLYECLRPVFHVTYIHG-----LTSFYISCDTKTGKKAIKKTIFGYINGIM 85
            |||.::|::             :|.::.|.|     |..|       ..:..::|:..|.|..:.
  Fly     9 QPLLQQFQQ-------------LFFISKIAGILPQDLEKF-------RSRNLLEKSRNGMIYMLS 53

  Fly    86 HIAMFVFAYSLTIYN---------NCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPN 141
            .:.::|..|::.||:         ..:|..::.....:||.|.:|.:..        .|||....
  Fly    54 TLILYVVLYNILIYSFGEEDRSLKASQSTLTFVIGLFLTYIGLIMMVSD--------QLTALRNQ 110

  Fly   142 HRLERCLQKFHTMDVQL---------QTVG--VKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSV 195
            .|:....::...:|.:|         .|:|  ::||....:.|...:|:|.: |.::......|:
  Fly   111 GRIGELYERIRLVDERLYKEGCVMDNSTIGRRIRIMLIMTVIFELSILVSTY-VKLVDYSQWMSL 174

  Fly   196 LYSSEVAPTMALHFTFLIQHTVIAIAIALFSCFTYLVEMRLVMVNKVLKNLAH------------ 248
            |:.....|      ||:.....|..|::|     |.::.|...:|..|:.|..            
  Fly   175 LWIVSAIP------TFINTLDKIWFAVSL-----YALKERFEAINATLEELVDTHEKHKLWLRGN 228

  Fly   249 -------------QWDTR---------------------SLKAVNQKQRSLQCLDSF--SMYTIV 277
                         |:|:.                     |....|:.......::||  ::....
  Fly   229 QEVPPPLDSSQPPQYDSNLEYLYKELGGMDIGSIGKSSVSGSGKNKVAPVAHSMNSFGEAIDAAS 293

  Fly   278 TKDP-----AEIIQES---------------MEIHHLICEAAATANKYFTYQLLTIISIAFLIIV 322
            .|.|     ..::.||               .::|..|||.....|:.::|.:|::::..|||..
  Fly   294 RKPPPPPLATNMVHESELGNAAKVEEKLNNLCQVHDEICEIGKALNELWSYPILSLMAYGFLIFT 358

  Fly   323 FDAYYV--------LETLLGKSKRESKFKTVEFVTFFS--CQMILYLIAIISIVEGSNRAIKKSE 377
            ...|::        :.:|...:|  :.|.||..:::.|  |..::||         |.:..:.|:
  Fly   359 AQLYFLYCATQYQSIPSLFRSAK--NPFITVIVLSYTSGKCVYLIYL---------SWKTSQASK 412

  Fly   378 KTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQ 442
            :||..:|..........:.|.:...|::|::..::|:|.|.|.:|....:.:||.:|:|||||:|
  Fly   413 RTGISLHKCGVVADDNLLYEIVNHLSLKLLNHSVDFSACGFFTLDMETLYGVSGGITSYLIILIQ 477

  Fly   443 FTSNSPNNGYGNGSSCCETFNNMTN 467
            |     |..........:|||::.:
  Fly   478 F-----NLAAQQAKEAIQTFNSLND 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 95/500 (19%)
Gr66aNP_523971.3 7tm_7 21..478 CDD:285581 94/494 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450268
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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