DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr43a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:467 Identity:97/467 - (20%)
Similarity:191/467 - (40%) Gaps:99/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VFHVTYIHGLTSFYISCDTKTGKKAIKKT-IFGYINGIMHIAMFVFAYSLTIYN-NCESVASYFF 110
            :|:::.:..|.. |.:.....|:..|.:: :|...:..:.:.|....|...::: |.|......|
  Fly    10 IFYISKVLALAP-YATVRNSKGRVEIGRSWLFTVYSATLTVVMVFLTYRGLLFDANSEIPVRASF 73

  Fly   111 R-----SRITYFGD----LMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIM 166
            |     |::....|    :|.||||      :|...|..|..|| ...:.:.:|..|..      
  Fly    74 RMKSATSKVVTALDVSVVVMAIVSG------VYCGLFSLNDTLE-LNDRLNKIDNTLNA------ 125

  Fly   167 YSKVLRFSY----MVLISMFLVNVLF---TGGTFSVLYSSEVA------------PTMALHFTFL 212
            |:...|..:    |..:|:..:::|.   .|....:.....:|            |..:|:|.. 
  Fly   126 YNNFRRDRWRALGMAAVSLLAISILVGLDVGTWMRIAQDMNIAQSDTELNVHWYIPFYSLYFIL- 189

  Fly   213 IQHTVIAIAIALFSCFTYLVEMRLVMVNKVLKN--LAHQWDTRSLK----------AVNQK---- 261
               |.:.:.||..:   |.:..|...:|::|.:  ||....|.::|          :||:.    
  Fly   190 ---TGLQVNIANTA---YGLGRRFGRLNRMLSSSFLAENNATSAIKPQKVSTVKNVSVNRPAMPS 248

  Fly   262 --QRSLQCLDSFSMYTIVTKD-------------------PAE----IIQESMEIHHLICEAAAT 301
              ..||..|:..::.:....|                   ||:    :::...:.|..:.:....
  Fly   249 ALHASLTKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNKGLLLKSLADSHESLGKCVHL 313

  Fly   302 ANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIV 366
            .:..|...:|.|:....|.:|..||::...||  |||::.:..|:.:  :.|   .:.:.::.:|
  Fly   314 LSNSFGIAVLFILVSCLLHLVATAYFLFLELL--SKRDNGYLWVQML--WIC---FHFLRLLMVV 371

  Fly   367 EGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISG 431
            |..:.|.::|.||..||..:..|.....:.|.:::|..||:.:..:|:|.||..::||:..:.:.
  Fly   372 EPCHLAARESRKTIQIVCEIERKVHEPILAEAVKKFWQQLLVVDADFSACGLCRVNRTILTSFAS 436

  Fly   432 ALTTYLIILLQF 443
            |:.|||:||:||
  Fly   437 AIATYLVILIQF 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 95/465 (20%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 97/467 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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