DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr28b and Gr33a

DIOPT Version :10

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_525102.4 Gene:Gr33a / 34641 FlyBaseID:FBgn0032416 Length:475 Species:Drosophila melanogaster


Alignment Length:503 Identity:98/503 - (19%)
Similarity:185/503 - (36%) Gaps:159/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CLRPVFHV--------TYIHGLTSFYISCDTKTGKKAIKKTIFGYINGIMHIAMFVF--AYSLTI 98
            |:.|:|:|        ::|.|| ....||::..   .:...:|      ||:..|::  ...|::
  Fly    34 CIVPIFYVACYLLINLSHIIGL-CLLDSCNSVC---KLSSHLF------MHLGAFLYLTITLLSL 88

  Fly    99 YNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGV 163
            |...|     ||:.......|:..::                    ::| |:...|| :::...|
  Fly    89 YRRKE-----FFQQFDARLNDIDAVI--------------------QKC-QRVAEMD-KVKVTAV 126

  Fly   164 KIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFSCF 228
            |  :|....|:::.|..:|         ||::.|.     ..:|:.||    ..:|....:.|.|
  Fly   127 K--HSVAYHFTWLFLFCVF---------TFALYYD-----VRSLYLTF----GNLAFIPFMVSSF 171

  Fly   229 TYL---------------VEMRLVMVNKVLKNLAHQ----------WDTRS-----LKAVN---- 259
            .||               :..|...:|.:|:.:..:          :|..|     .|.|.    
  Fly   172 PYLAGSIIQGEFIYHVSVISQRFEQINMLLEKINQEARHRHAPLTVFDIESEGKKERKTVTPITV 236

  Fly   260 -------------------QKQRSLQCLDSFSMYTIVTKDPAEI------------------IQE 287
                               ::|...|..|...:.|...:|..:.                  :.:
  Fly   237 MDGRTTTGFGNENKFAGEMKRQEGQQKNDDDDLDTSNDEDEDDFDYDNATIAENTGNTSEANLPD 301

  Fly   288 SMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLET----LLGKSKRESKFKTVEFV 348
            ..::|..|...:...|..|..|.:..::..|::.:|..:  |||    ::|...|...:.|..:|
  Fly   302 LFKLHDKILALSVITNGEFGPQCVPYMAACFVVSIFGIF--LETKVNFIVGGKSRLLDYMTYLYV 364

  Fly   349 TF-FSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVK-----EKLQQFSMQLM 407
            .: |:..|:.|::..:..     .|...|:::..|||.::.|..:..:.     .|::.|::|.:
  Fly   365 IWSFTTMMVAYIVLRLCC-----NANNHSKQSAMIVHEIMQKKPAFMLSNDLFYNKMKSFTLQFL 424

  Fly   408 HLK--INFTAAGLFNIDRTLYFTISGALTTYLIILLQF--TSNSPNNG 451
            |.:  ..|...|||.:|.|..|:...|.|:|||:||||  |:...|.|
  Fly   425 HWEGFFQFNGVGLFALDYTFIFSTVSAATSYLIVLLQFDMTAILRNEG 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:462463 92/490 (19%)
Gr33aNP_525102.4 7tm_7 2..465 CDD:473258 95/494 (19%)

Return to query results.
Submit another query.